| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1556 |
|---|
| Symbol | |
|---|
| ID | 8415854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 1849462 |
|---|
| End bp | 1850340 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645024524 |
|---|
| Product | degV family protein |
|---|
| Protein accession | YP_003181913 |
|---|
| Protein GI | 257791307 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0165981 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATGA ACTTCGAGAT CGTCACCGAT TCCAGCTGCA ACCTCGTCGA GGACATGATC
GACGAATTCG GTCTGCATAT CCTGCCCCTC ACCTTCATGG TGGACGGCGA GCAGTATCAA
AGCTATCTCA AGGGGCAGCA CACCGACCTC AAGCAGTTCT ACACGATGAT GCGCGACGGC
AAGGTGATCA CCACGTCGCT GCCGAACCTG GCCGACTCCG AGGCGCTCAT GCGCGGGCTG
CTGGAACAGG GACGCGACGT GCTGTACCTG GGCTTCTCCA GCGGGCTGTC GGGTACCTAC
GAGGCCGTCG AGCTCCTGGT GAAGCAGCTG GCCGCGGAGT TCCCCGAGCG GAAGCTGCGC
TCCGTGGACA CGCTGGCCGC CTCGGGCGGC GAAGGCCTGC TCGTGTGGCA CGCCGTGCAG
CGCGCCCGAG GCGGCGCCTC CATCGACGAG GTGCGCGACT GGGTAGAGCA GCACAAGTTG
AACCTGGCGC ACTGGTTCAC CGTGGACGAC CTCATGTTCC TGTTCCGCGG CGGGCGCGTG
TCGAAGACCG CGGCGTGGGC GGGCACCATG CTCAACATCA AGCCGGTCAT GCACGTGGAC
GACGAGGGGC GCCTCATCCC CCTGGAGAAG GTGCGCGGAC GCAAGAAGTC GTTGCACGCC
CTGGTGGACC ACATGGAGAA GACGGCCATC GCCCCCATCG ACCAGCAGAT GGTGTTCATC
ACGCACGGCG ACTGCCTCGA GGACGCCGAG TACGTGGCCC AAGAGGTGAA GGAGCGCTTC
GGCGTGAAGG AGGTCGTCAT CAACTACGTC GACCCCGTCA TCGGCGCCCA TTCGGGACCT
GGCACCATGG CGCTGTTCTT CCTGGCCGAC AAGCGATAG
|
|---|
| Protein sequence | MPMNFEIVTD SSCNLVEDMI DEFGLHILPL TFMVDGEQYQ SYLKGQHTDL KQFYTMMRDG
KVITTSLPNL ADSEALMRGL LEQGRDVLYL GFSSGLSGTY EAVELLVKQL AAEFPERKLR
SVDTLAASGG EGLLVWHAVQ RARGGASIDE VRDWVEQHKL NLAHWFTVDD LMFLFRGGRV
SKTAAWAGTM LNIKPVMHVD DEGRLIPLEK VRGRKKSLHA LVDHMEKTAI APIDQQMVFI
THGDCLEDAE YVAQEVKERF GVKEVVINYV DPVIGAHSGP GTMALFFLAD KR
|
|---|
| |