| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1536 |
|---|
| Symbol | |
|---|
| ID | 8415834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 1830881 |
|---|
| End bp | 1831561 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645024504 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003181893 |
|---|
| Protein GI | 257791287 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.38165 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0345919 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATTC TGACCATCGA CCATCTCACC AAGGTGTACG GAAGCGGCCC CACGGCGCTC
AAGGCGCTCG ACGACGTGTC GTTCAGCGTG GCCGCGGGCG AGTTCGTGGC CATCGTCGGC
TCGTCGGGCT CCGGCAAGTC GACGCTTCTG CACCTCATGG GCGGCGTCGA CCGCCCCACC
TCCGGCACGG TGCTGCTGAA CGGCGCGGAC GTGTACGCGC GCTCCGACGA GGAGCTGGCC
GTGCTGCGCC GTCGCGACGT GGGGCTGGTC TACCAGTTCT ACAACCTCAT CCCCGTGCTC
AACGTGGTGG AGAACATGAC GCTTCCCGTG CTCATGGACG GACGCGCCGT GAACGAAGAG
CGCCTCGGCA TGCTTCTGGA CGGCTTGGGA CTGCGCGGCC ATGAGCGCTT CCTGCCCAAT
CAGCTGTCAG GCGGACAGCA ACAGCGCGTG GCCATCGGGC GCGCGCTCAT GAACGCGCCT
GCCGTGGTGC TGGCCGACGA GCCCACCGGC AACCTCGACT CGCGCAACTC GCACGAGATC
ATGGCGCTTT TGCGCGAGTC GAACAAGCGC TTCGACCAGA CGCTCGTGGT GATCACGCAT
GACGAGGACA TCGCCTGCAT GGCCGACCGC GTCATCGCCA TCGAGGATGG CCGCATCGCC
TCCGACGAAA GGAGGCGCTG A
|
|---|
| Protein sequence | MDILTIDHLT KVYGSGPTAL KALDDVSFSV AAGEFVAIVG SSGSGKSTLL HLMGGVDRPT
SGTVLLNGAD VYARSDEELA VLRRRDVGLV YQFYNLIPVL NVVENMTLPV LMDGRAVNEE
RLGMLLDGLG LRGHERFLPN QLSGGQQQRV AIGRALMNAP AVVLADEPTG NLDSRNSHEI
MALLRESNKR FDQTLVVITH DEDIACMADR VIAIEDGRIA SDERRR
|
|---|
| |