Gene Elen_1442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1442 
Symbol 
ID8415740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1721029 
End bp1722708 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content67% 
IMG OID645024411 
Productputative ABC transporter ATP-binding protein 
Protein accessionYP_003181800 
Protein GI257791194 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.465539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.471645 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGAAT TCATCTACCA AATGTATCAG GCGCGCAAGG CGCACGGCGA GAAGGTCATT 
CTCGACGACG TGACCCTGTC GTTCTACCCC GGCGCGAAGA TCGGCGTCGT GGGACCCAAC
GGCATGGGCA AGTCGACGCT GCTCAAGATC ATGGCGGGCC TCGAAGAGGT GTCGAACGGC
GACGCGCGCC TCACGCCCGG CTACACGGTG GGCATCCTGC AGCAGGAGCC GCCTCTGGAC
GACGACAAGA CCGTCATCGA GAACATCGAG ATGGCGTTCG GCGAGGTGAA GGCCAAGATC
GACCGCTTCA ACAAGATCGG CGAGGAGATG GCCGAGCCCG ACGCCGACTT CGACGCGCTC
ATGGCCGAGA TGGGCGAGCT GCAAGACGCC ATCGACGCGG CGAACGGGTG GGATCTCGAC
AGCCAGCTGT CGCAGGCCAT GGACGCGCTG CAGTGCCCCG ACCCCGACAT GCCGGTGAAC
GTGCTATCCG GCGGCGAGCG CCGTCGCGTG GCGCTGTGCA AGCTGCTGCT GGAGGCGCCC
GACCTGCTGC TGCTCGACGA GCCCACCAAC CACCTGGACG CCGAGTCGGT GCTGTGGCTG
GAGCAGTTCC TGCGCACCTA CCCCGGCGCG GTGCTGGCCG TCACGCACGA CCGCTACTTC
CTGGACAACG TGGCCGAGTG GATCTGCGAG GTGGACCGCG GCAGCCTCTT CCCGTACAAG
GGCAACTACT CCACCTACCT CGAGACGAAG GCCGCGCGCC TGGAGGGCCA GGGCCAGCGC
GAGGAGAAGC TGGCGAAGCG CCTGCGCTCG GAACTGGAGT GGGTGCGATC CAGCCCCAAG
GCGCGCCAGG CCAAGAGCAA GGCCCGCATC GAGCGCTACG AGCAGATGGC GGCCGAGGCA
CGCTCGTTCG AGAAGGCCAG CGTGTCGGAC ATCACCATCC CCGTGCCGCC GCGCCTGGGC
GCGAAGGTCA TCGAGGCCAA GCACATCAGG AAGGCGTTCG GCGACCGCGT GCTCATCGAC
GACTTGTCGT TCACGCTGCC CCAGGGCGGC ATCGTGGGCG TGATCGGCCC GAACGGCGTG
GGCAAGTCCA CGCTGTTCAA AGCCATCGTG GGCTTGGAGC CCCTGTCGGG CGGCGAGCTT
GAGATCGGCG AGTCGGTGAG CATCTCCTAC GTCGACCAGA ACCGCGAGGG CATCGACCCG
AACAAGAAGC TGTGGGAGGT CGTCTCCGAC GGCCTGGACT ACATGAAGGT GGGCGACACC
GAGATTCCCA GTCGCGCCTA CGTGGCCAGC TTCGGCTTCA AGGGGCCCGA CCAGCAGAAG
CCGGCCGGCG TGCTGTCGGG CGGCGAGCGC AACCGCCTGA ACCTGGCGCT GACGCTCAAG
CAGGGCGGCA ACCTCCTGCT GCTCGACGAG CCTACGAACG ACCTCGACGT CGAGACGCTG
GAAAGCCTGG AGGAGGCGCT GCTGGCATTT CCCGGCTGCG TCGTGGTGAC CAGCCATGAC
CGCTGGTTCC TCGACCGCAT CGCCACGCAC ATCCTGGCGT GGGAGGGCAC CGACGAGAAC
CCGGGCAACT GGCACTGGTT CGAGGGCAAC TTCGACGACT ACCAGAAGAA CCGCGTCGAG
CGCCTGGGCG AGGAGGCCGC GCGTCCGCAC CGCATCCACC GCAAGCTCAC CCGCGACTAG
 
Protein sequence
MAEFIYQMYQ ARKAHGEKVI LDDVTLSFYP GAKIGVVGPN GMGKSTLLKI MAGLEEVSNG 
DARLTPGYTV GILQQEPPLD DDKTVIENIE MAFGEVKAKI DRFNKIGEEM AEPDADFDAL
MAEMGELQDA IDAANGWDLD SQLSQAMDAL QCPDPDMPVN VLSGGERRRV ALCKLLLEAP
DLLLLDEPTN HLDAESVLWL EQFLRTYPGA VLAVTHDRYF LDNVAEWICE VDRGSLFPYK
GNYSTYLETK AARLEGQGQR EEKLAKRLRS ELEWVRSSPK ARQAKSKARI ERYEQMAAEA
RSFEKASVSD ITIPVPPRLG AKVIEAKHIR KAFGDRVLID DLSFTLPQGG IVGVIGPNGV
GKSTLFKAIV GLEPLSGGEL EIGESVSISY VDQNREGIDP NKKLWEVVSD GLDYMKVGDT
EIPSRAYVAS FGFKGPDQQK PAGVLSGGER NRLNLALTLK QGGNLLLLDE PTNDLDVETL
ESLEEALLAF PGCVVVTSHD RWFLDRIATH ILAWEGTDEN PGNWHWFEGN FDDYQKNRVE
RLGEEAARPH RIHRKLTRD