Gene Elen_1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1406 
Symbol 
ID8415704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1678649 
End bp1679170 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content69% 
IMG OID645024375 
Productprotein of unknown function UPF0102 
Protein accessionYP_003181764 
Protein GI257791158 
COG category[L] Replication, recombination and repair 
COG ID[COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase 
TIGRFAM ID[TIGR00252] conserved hypothetical protein TIGR00252 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000418677 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCAGG ATACGGCGGC AACGATCGAA TGGCAGGACG GCGAGCAGGC GACGTGCGGA 
AAGAAGGCCG GCGCGGGCGA GCGGCGAGGA GTAGGCTCGG GGGCCAAGCG GCGTGCGAAA
CGGGGCGAAC GGGCGCAGGA TCGCGAGAAG ACGGCGGGGG AGCGCAACGC GGAGCTGGGG
CGTAGAGGCG AGGACGCCGC CGCTCGCTTT CTCGACCGGC GCGGCTACGA GATCGTCGAG
CGCAACTGGA CGTGCGCGGC GGGTGAGGCC GACATCATCG CGCGCGACGG CGACAGCGTC
GTGTTCGTGG AGGTGAAGAC CAGGTCGAGC TGCGACTGCG GCATGCCGGC GGAAGCGGTG
GACGAGGCCA AGCGCGACCG CTACGAGCGC ATCGCGGCGC TGTTCCTGCA AGGCTTCGAC
GTGGTGGACG TGCCGGTGCG CTTCGACATC GTGTCCATCG TGGCGATCTC GCCCGACCGC
GCGATGATCC GCCACCACAT CAACGCGTTC TCGGGCCGAT GA
 
Protein sequence
MYQDTAATIE WQDGEQATCG KKAGAGERRG VGSGAKRRAK RGERAQDREK TAGERNAELG 
RRGEDAAARF LDRRGYEIVE RNWTCAAGEA DIIARDGDSV VFVEVKTRSS CDCGMPAEAV
DEAKRDRYER IAALFLQGFD VVDVPVRFDI VSIVAISPDR AMIRHHINAF SGR