Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_1380 |
Symbol | |
ID | 8415678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | + |
Start bp | 1646909 |
End bp | 1647430 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645024349 |
Product | PRC-barrel domain protein |
Protein accession | YP_003181738 |
Protein GI | 257791132 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000425186 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.828358 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTACGT GGGCGAACGT TGCCGAGCTA TCTAAAACGA AGACCTTGAC AGGAGGGCTC GTCGCGCGCT GCGCGCCGGG TCTTCCTTTT TTGCTGGAAG AGGGCATGGA GGTGGCCTTC GTGCCGCCTC GGCACGATGC GCCGCGCCGT GCGCGCGTGC TGTCCGTGCA GGACGCGGGC AGAGACGCCT TCCTCGTGAC GTTCGAAGGC GTCGACTCCA TCGACATCGC CGAGTTGTTG GTGGGGTGCA GCTGCCTCGT ACGCCGCGCC GATCTGCCCG AAAGCGCGCT GGCCGCCGAG GCCGACGGCT TGGAAGGCTT TGAAGTGCAC GACGCGCGCG CGGGCTTCGT GGGCGTCGTG GAGTCGGTGG TGGAGAATCC CGGGCAGTTC CTGCTGAGCG TCGCGCCCGC CGACGGGGGC AGGCGCGTGC TCGTGCCGCT TGTGGACGCG CTGGTCGTCG GTTTGGACGA GGACGCGCGC CGCATCGACG TCGACTTGCC GGACGGCCTG CTGGACCTGT AG
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Protein sequence | MRTWANVAEL SKTKTLTGGL VARCAPGLPF LLEEGMEVAF VPPRHDAPRR ARVLSVQDAG RDAFLVTFEG VDSIDIAELL VGCSCLVRRA DLPESALAAE ADGLEGFEVH DARAGFVGVV ESVVENPGQF LLSVAPADGG RRVLVPLVDA LVVGLDEDAR RIDVDLPDGL LDL
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