| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1311 |
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| Symbol | |
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| ID | 8415606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Eggerthella lenta DSM 2243 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013204 |
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| Strand | + |
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| Start bp | 1575542 |
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| End bp | 1576771 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 645024277 |
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| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
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| Protein accession | YP_003181669 |
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| Protein GI | 257791063 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.046516 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCCAAG CCTCAAGCAA GCAAGCCCAA GAGCGGAACA ACGCGGCGGT TGCCTCGATC
GAAGCCGAAG ACATCCTGGA GGAAGACGCC CTCGACGACG AGCCCGATGT GGTCGACGCC
GGCGACGGAC TCGACGACGA TAAGCTTGAA AGCCCCCTGT CCGATGACAG CGACGACGAA
GACCTGCTCG AAGGCATTCC TGAAGAGGAG CTTAAGGCGA CGGTCGAGGT TCAGCTGCCC
AAGGTGGCGG GCAAGAGCAA GGTGCGCTCC GTGCGCAAGC GCAATGCCGA CGCCAGCGTG
ACCATGCTCA CGGGCGACCC CGTCCGCATG TACCTCAAGG AGATCGGCAA GGTCCCGCTG
CTCACGGCCG CCGAAGAGAT CGACCTCGCC ATGAAGATCG AGGCCGGCGT GGCCGCCATG
GAGGAGCTTG AGAAGGCCGA GGACGAGGGC ATCGAGCTCG AACGCCGCGA GAAGCGCCGC
CTCGGCCGCA TCGAGCAGGT GGGCATCGAC GCGAAGCAGC AGCTTATCGA GGCGAACCTG
CGTCTCGTCG TGTCCATCGC CAAGCGCTAC GTAGGACGCG GCATGCTGTT CCTCGACCTT
ATCCAGGAGG GCAACCTCGG CCTCATCCGC GCCGTCGAGA AGTTCGACTA CACGAAGGGC
TTCAAGTTCT CGACGTACGC CACCTGGTGG ATCCGCCAGG CCATCACGCG CGCCATCGCC
GATCAGGCCC GCACCATCCG CATTCCCGTG CACATGGTGG AGACCATCAA CAAGCTCGTG
CGCATCCAGC GCCAGCTGTT GCAGGAGCTC GGCCGCGAGC CCAGCCCCGA GGAGATCGGC
AAGGAGATGG GTCTGCCCGC CGAGCGCGTG CGCGAGATCC AGAAGATCTC GCAGGAGCCC
GTGTCGCTGG AAACGCCTAT CGGCGAGGAG GAGGACTCCC AGCTGGGCGA CTTCATCGAG
GACGACGCCG CCGTGGTGCC GCCTGACGCC GCCTCGTTCA GCATGCTGCA AGAGCAGCTG
TCGAAGGTGC TCGACGGCCT GGCCGAACGC GAGCGCAAGG TGATCAGCCT GCGCTTCGGC
CTGGAGGACG GCCATCCCCG CACGCTCGAG GAGGTCGGAC GCGAGTTCGG CGTCACGCGC
GAGCGCATCC GCCAGATCGA GAGCAAGACG CTGGCGAAGC TGCGCCACCC GTCCCGCTCG
AGCAAGCTGA AAGACTACCT GGAAGATTAA
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| Protein sequence | MAQASSKQAQ ERNNAAVASI EAEDILEEDA LDDEPDVVDA GDGLDDDKLE SPLSDDSDDE
DLLEGIPEEE LKATVEVQLP KVAGKSKVRS VRKRNADASV TMLTGDPVRM YLKEIGKVPL
LTAAEEIDLA MKIEAGVAAM EELEKAEDEG IELERREKRR LGRIEQVGID AKQQLIEANL
RLVVSIAKRY VGRGMLFLDL IQEGNLGLIR AVEKFDYTKG FKFSTYATWW IRQAITRAIA
DQARTIRIPV HMVETINKLV RIQRQLLQEL GREPSPEEIG KEMGLPAERV REIQKISQEP
VSLETPIGEE EDSQLGDFIE DDAAVVPPDA ASFSMLQEQL SKVLDGLAER ERKVISLRFG
LEDGHPRTLE EVGREFGVTR ERIRQIESKT LAKLRHPSRS SKLKDYLED
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