| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1267 |
|---|
| Symbol | |
|---|
| ID | 8415562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 1522820 |
|---|
| End bp | 1524691 |
|---|
| Gene Length | 1872 bp |
|---|
| Protein Length | 623 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 645024234 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003181626 |
|---|
| Protein GI | 257791020 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00288622 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGC AGGAGAACGC CCAGGCGCAG GAACCTCGCC GCGGACCCAT GGGCCACGGT
CCCGGCGGGC GCATGATGCC CGGCGAGAAG CCGAAGAACC TCAAGGGAAC GCTTGCCAAG
CTGATCGCCT TCATGGGCCG TTTCAAGGCA GCCATCGTGG TGGTGCTCGT GTTTGCCGTG
GGCTCCACCA TCTTCAACAT CGTGGGGCCG AAGGTGCTGT CCACGGCCAC TACCGAGCTG
TTCAACGGCA TCGTGGCGAA GATCGACGGC TCGGGCGGCA TCGACTTCGA CGCGATCGCG
CGGATCCTCG TGTTCACGCT GGGTCTGTAC CTGCTGTCCG CGGCATGCTC GTTCGTGCAG
GGCTGGATCA TGAGCTCGGT TTCGCAGCGC ACGTGCTACC AGCTGCGCGG CGCCATCGCC
GACAAGATCG ACCGCATGCC CATGGGCTAC TTCGAGCGCA CGAGCGTGGG CGACACCCTG
TCGCGCATCA CGAACGACGT GGACACGCTG GGCCAGAGCC TGAACCAGGG CGTCACCCAG
CTCATCACGT CGGTGACCAC CATCATCGGC GTGCTCATCA TGATGCTGTC CATCAACCCG
CTCATGACGC TGATCACCGT GGTCATTCTT CCGGTTTCCG TCGTGCTCAT CATGGTGGTG
GTGAAGCGCT CGCAGAAGTA CTTCGTGGCG CAGCAGCGCA CGCTCGGCAA GATCAACGGC
ATCGTGGAGG AGACGTTCTC GGGTCACGCT ATCGTGAAGG CGTTCAACCG CGAGGACGGC
ACGGTCGACC GCTTCAACGA GACGAACGCG AAGCTGTACG GGTCGGCGTG GAAGTCGCAG
TTCTTCAGCG GCCTCATGCA GCCTATCATG ACGTTCGTCG GCAACCTGGG CTACGTGGCC
GTCGCCATCG CCGGCAGCTT CCTGGCCGTG CAAGGCGTCA TCACGGTGGG CGACATCCAG
GCGTTCATCC AGTACGTGAA GAACTTCACG CAGCCCATCA CCCAGCTCAC GCAGGTGTCC
AACGTGCTGC AGCAGATGGC CGCGGCCGCC GAGCGCATCT TTGAGTTCCT CGACGCGCCC
GAGGAGGAGC CCGACCATGC GACCGCCCGT ACCGCCGACG TGGAGTGCAA CGTGCAGTTC
GACCACGTGC GCTTCGGCTA CGATCCGGAG AAGCCGGTGA TCAAGGACTT CTCGGCCCAG
GTGTCGGAAG GCCAGACCGT CGCGCTGGTC GGCCCCACGG GCGCCGGCAA GACCACCATG
GTCAAGCTGC TCATGCGCTT CTACGACGTG CAGTCGGGCT GCATCAAGAT CGGCGGCACG
GACATCCGCG ATTTCGCGCG CGACGATCTG CGCAGCCTGT TCGGCATGGT GCTGCAGGAC
ACGTGGCTGT TCCACGGCAC CATTCGCGAC AACATCCGCT ACGGCAAGCT GGACGCCACC
GACGAGGAGG TGGAGGCGGC GGCGAAGGCG GCCTACGTCA ACCACTTCAT CCAGACGCTG
CCGCAGGGCT ACGACACCGA GATCAACGAG GACGCCAGCA ACATCAGCCA GGGCCAGCGC
CAGCTGCTGA CCATCGCGCG CGCCATCCTG GCCGACCGCC GCATGCTCAT CCTCGACGAG
GCCACCAGCT CGGTGGACAC GCGCACCGAG GAGCGTATCC AGAAGGCCAT GGACAACCTC
ATGGCCGGGC GCACCTCGTT CGTCATCGCG CATCGCCTGT CCACCATCAA GAGCGCGGAT
CTCATCCTCG TCATCCGCGA CGGCGACATC GTGGAGCAGG GCACGCACGA GGAACTGCTG
GCGCTTGGCG GTTTCTACGC GGAGTTGTAT AATTCTCAGT TCACCGAGAC GATTGACGAG
GTGGAGGACT AG
|
|---|
| Protein sequence | MSAQENAQAQ EPRRGPMGHG PGGRMMPGEK PKNLKGTLAK LIAFMGRFKA AIVVVLVFAV
GSTIFNIVGP KVLSTATTEL FNGIVAKIDG SGGIDFDAIA RILVFTLGLY LLSAACSFVQ
GWIMSSVSQR TCYQLRGAIA DKIDRMPMGY FERTSVGDTL SRITNDVDTL GQSLNQGVTQ
LITSVTTIIG VLIMMLSINP LMTLITVVIL PVSVVLIMVV VKRSQKYFVA QQRTLGKING
IVEETFSGHA IVKAFNREDG TVDRFNETNA KLYGSAWKSQ FFSGLMQPIM TFVGNLGYVA
VAIAGSFLAV QGVITVGDIQ AFIQYVKNFT QPITQLTQVS NVLQQMAAAA ERIFEFLDAP
EEEPDHATAR TADVECNVQF DHVRFGYDPE KPVIKDFSAQ VSEGQTVALV GPTGAGKTTM
VKLLMRFYDV QSGCIKIGGT DIRDFARDDL RSLFGMVLQD TWLFHGTIRD NIRYGKLDAT
DEEVEAAAKA AYVNHFIQTL PQGYDTEINE DASNISQGQR QLLTIARAIL ADRRMLILDE
ATSSVDTRTE ERIQKAMDNL MAGRTSFVIA HRLSTIKSAD LILVIRDGDI VEQGTHEELL
ALGGFYAELY NSQFTETIDE VED
|
|---|
| |