Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_1225 |
Symbol | |
ID | 8415516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | + |
Start bp | 1472243 |
End bp | 1473628 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 645024188 |
Product | tryptophan synthase subunit beta |
Protein accession | YP_003181584 |
Protein GI | 257790978 |
COG category | [R] General function prediction only |
COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.524383 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0499617 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAC AAGCACCGCA TCGTCTGTAC CTGCGCGAAG ACCAGATCCC GACGCAGTGG TACAACCTGC GGGCCGACAT GCCGGAGAAG CCGGAGCCCA TCCGGCTGCC GAACGGCCAG GTCGCGGCAC CTGAGGATCT GGCACCTGTG TTCTGCGACG AGCTGGTGCG CCAGGAGCTG GACGACGACA CGGCCTACGT CGACATCCCC GAACCGGTGT TGGAGATGTA CCGCATCTAC CGCCCGTCGC CCTTGTGCCG CGCGTACAAC CTGGAGAAGG CCCTCGGCAC GCCCGCCAAG ATCTACTACA AGTTCGAAGG CAACAACACG TCCGGCTCGC ACAAGCTGAA CTCTGCCATC GCCCAGGCTT ATTACGCGAA GGCTCAGGAT CTCGACGGCA TCACCACCGA GACGGGTGCG GGCCAGTGGG GCACGGCGCT CGCCGAGGCG TCGGCGCATT TCGGGCTCAA TCTGGACGTG TTCATGGTGA AGTGCTCCTA CGAGCAGAAG CCGTTCCGCC GCAACATCAT GGAGACGTTC GATGCGCACG TGACGCCCTC GCCGTCCGAT ACCACCGAGA TCGGCCGCAA GATGCTCGCC GAGCATCCCG ACTCCTCGGG CTCGCTGGGC ACGGCCATCT CCGAGGCCGT GGAACGCGCG CTCAACATTC CCGGCAACAA GGGCCGCTAC ACGCTGGGGT CGGTGCTCAA CCAGGTGGTG CTGCACCAGT CGGTCATCGG CTTGGAGAGC TACGCTGCCT TCGAGGAGCT GGGCGAGTAC CCCGACGTGG TCATCGGCTG CGCGGGCGGC GGCTCGAACC TCGGCGGCCT CATCGCGCCG TTCATGCGCG ACAAGATCAA AGGCGTCCGT CCCGACACGC GCTTCGTCGC CGTCGAGCCG GCCAGCTGCC CGAGCCTCAC GCGCGGGCGC TACGCCTACG ACTTCGCCGA CACGGGCCGC ACCTGCCCGC TCGCGAAGAT GTACACGCTG GGCAACGGCT TCCTGCCCAG CCCCGACCAT GCTGGCGGCC TGCGCTACCA CGGCATGAGT CCCATCGTGT CGAAGCTCAA GCACGACGGC TACCTGGACG CCGTGGCCGT GAAGCAGACC GACGTGTTCG CGGCGGCCGT GGAGTTCGCG CGGCTCGAGA CCATCCTGCC GGCTCCCGAG AGCGCCCACG CCATCTTCCA GGCCGTGGAG GAGGCCAAGC GCTGCGCCGA GACGGGCGAG GAGAAGACGA TCCTCTTCGG CCTCACGGGC ACGGGCTACT TCGACATGAA GGCCTACGAC GCGTACAACC GCGGCGAGAT GAGCGACCAT GTCCCCACCG ACGAGGAGCT GGAGGCGGGC TTCGCCAGCA TCCCGCACAT CGAGGGCGTG CAGTAG
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Protein sequence | MTEQAPHRLY LREDQIPTQW YNLRADMPEK PEPIRLPNGQ VAAPEDLAPV FCDELVRQEL DDDTAYVDIP EPVLEMYRIY RPSPLCRAYN LEKALGTPAK IYYKFEGNNT SGSHKLNSAI AQAYYAKAQD LDGITTETGA GQWGTALAEA SAHFGLNLDV FMVKCSYEQK PFRRNIMETF DAHVTPSPSD TTEIGRKMLA EHPDSSGSLG TAISEAVERA LNIPGNKGRY TLGSVLNQVV LHQSVIGLES YAAFEELGEY PDVVIGCAGG GSNLGGLIAP FMRDKIKGVR PDTRFVAVEP ASCPSLTRGR YAYDFADTGR TCPLAKMYTL GNGFLPSPDH AGGLRYHGMS PIVSKLKHDG YLDAVAVKQT DVFAAAVEFA RLETILPAPE SAHAIFQAVE EAKRCAETGE EKTILFGLTG TGYFDMKAYD AYNRGEMSDH VPTDEELEAG FASIPHIEGV Q
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