| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1171 |
|---|
| Symbol | |
|---|
| ID | 8415462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 1405305 |
|---|
| End bp | 1406804 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 645024134 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003181530 |
|---|
| Protein GI | 257790924 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.323234 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGCG TGAGGCGGGA CGCGCGGACG CATGGAGCGC TCGGCGCGAG CCGCGGCCGC
GGACGCAGGT TTCCCTTGGG CGCGCTCATC CTGCGCTACT TCGCCTACGT GCTGGCCGCG
CTGCTGGCGC TGGCGCTGGC CGCGTACGCA GCGTTCGGCT TGCTCGTCGG AAGCGGGACG
GTGCTTCTGG CGAACTACGG CGATACGGCC CTGGACGAGA CGTCGGCGCA GCTCGCCGCG
CTGCCCTCCG CCGATGCCGA CGCGATCGAC GCCGCCGTGC CCTCGGCGTA CAGGTGGGCG
CTGTTCTCGC CGGACGGCGC GTATGCGGCC GGCGACGTTG CCTCGGGTGC GGTCGACGAT
GCCCGCGCGG CTGCGTTCGA CGGCCTGGCC ATCGATTACG AGACGTTTGG CATGACGCGG
TACGAGCCGG TGACCTTGGC CGACGGCTCG GTATGCGTGC TCGTGTACCA GTATCTGCCG
CAGTTCGCCT CGAAGGATCT GCGCGACGCG CTGCCGAACC CGCAGAACCT GCTGCTGGGC
GCGCTCGCCG TGCTGTCGGT GCTGACGCTG GTGGGCATCG CCGCGCGCGC CGCACGGGTG
ATCTCGCGCA AGATGGAGCC GCTCGCGGAC GCCGTGCGGC GCATCGAGGA GCGCGACCTC
GACTTCGAGG TTGCCTCGTC GCGCGTGCGC GAGATCGACG ACGTGCTGGC CGCGATGGAC
GGCATGCGCG CCTCGCTCAA GGACTCGCTG GAGGCGCAGT GGCGGGGCGA GCAGGCGCAG
CGCGAGCAGA TCGCCGCGCT GGCGCACGAT TTGAAGACGC CGCTCACCGT GGTGCGCGGC
AACGTCGACC TGCTGTTGGA GGGCGAGCTC TCGGGCGAGC AGCGCGCGTG CGCGGCCGAC
GTCGCCGAGG GCGCGCGCCA GATGGGAACG TACGTGTCCG CGCTCATCGA CGCGTCGCTG
GGCGTGGGCG CGTCGTTCGC GCCGAAGGAG GCGCGGCTGC GGCCGCTGCT CGAGCGCTTG
CGAGCGCAGG TCGAGGCGCT GGCGGCGGCG AGCGGCGTGC GCGTCGCCTG GAGCGAGGGC
GCGGACCTGC CCGCGATGAT GCTGTTGGAC GAGGCGCTGG TGGAGCGGGC GGTGGCGAAC
GTGGCGGCGA ACGCCGTCGA GCATGCGCCG GCCGGGTCGT CGGTTGCGGT GGACGTGCGG
GCAGACGTCG CCGCCGGCTG CTTGGCGCTG AGCGTGGCCG ACGAGGGTCC GGGCTTCTCG
TCGGAGGCTT TGCGCCGCGG CTGCGAGCGC TTCTACCAGG GCGATGCCGC ACGCGCGGCG
CGCGGCCACA GCGGCCTCGG GCTCCACGTC GCCGCCGAGA CAGCCGCGCG CCATGGCGGC
TCGGTGGAAT TGGCCAACCG CAGCGCCGCC GAGGGCGGCG GCGCGCGGGC GACGTTGCGG
TTGCCGCTGG GCCATGCGAC GCCGCAGGAG CCGGCCGGGC CGACGGGCTA CGCGGAGTAG
|
|---|
| Protein sequence | MDGVRRDART HGALGASRGR GRRFPLGALI LRYFAYVLAA LLALALAAYA AFGLLVGSGT
VLLANYGDTA LDETSAQLAA LPSADADAID AAVPSAYRWA LFSPDGAYAA GDVASGAVDD
ARAAAFDGLA IDYETFGMTR YEPVTLADGS VCVLVYQYLP QFASKDLRDA LPNPQNLLLG
ALAVLSVLTL VGIAARAARV ISRKMEPLAD AVRRIEERDL DFEVASSRVR EIDDVLAAMD
GMRASLKDSL EAQWRGEQAQ REQIAALAHD LKTPLTVVRG NVDLLLEGEL SGEQRACAAD
VAEGARQMGT YVSALIDASL GVGASFAPKE ARLRPLLERL RAQVEALAAA SGVRVAWSEG
ADLPAMMLLD EALVERAVAN VAANAVEHAP AGSSVAVDVR ADVAAGCLAL SVADEGPGFS
SEALRRGCER FYQGDAARAA RGHSGLGLHV AAETAARHGG SVELANRSAA EGGGARATLR
LPLGHATPQE PAGPTGYAE
|
|---|
| |