| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1088 |
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| Symbol | |
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| ID | 8415378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Eggerthella lenta DSM 2243 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013204 |
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| Strand | + |
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| Start bp | 1314539 |
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| End bp | 1316179 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 645024051 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_003181448 |
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| Protein GI | 257790842 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00846053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000000000541512 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGAAA CCGAAGCAAC CACGGAGGCT CCTGCGGCCG CTCCCGTCAA GCGACGTTCC
ACCAGCGTGA AGGCGAAGAC GCAGGGCAAG GCCGAGGGCG CAGCCACTCC GGGCCGCAAC
TCGTCGGCCA CGCGCACGCC GCGCAAATCG GTGAAGGCGG GCGGCGCGCA GCAGCAACAG
CCGCAGGGCG GTTCGAACAA CCGCCGCCAG AACGCCTCGA ACGCCGGCAA GCAGAACAAC
GGCGGCAGCA ATCGCCAGAA GCAGGGCGGC GGCCAGAACC GGCAGAACAA CAGCCAGAAC
CAGCGTCGTC AGCGTCGCCA GCACGACAAC AACCGCGGCA ACCGCGAAGT GCAGCCCAGC
GTGTCGCGCG AGGAGCTGGC GAAGCTCAAG GTGGCCGAGC TGCGCGAGAA GGCCGCCGAG
CTCAACCTCG ACGTGACGGG CCTCAAGAAG GCCGAGCTGG TGGAGGCCGT GTTCGAAGCC
AGTGTCAAGG CCGAGGGCTT CATCGAGGTG TCGGGCATCC TCGACATCCT GGCCGACGGC
TACGGCTTCC TCCGCACGCA GGGCTACCTG CCCAGCGAGA CGGATTGCTA CGTGGGTCTT
TCCACCATCC GCCGCAACGG CCTGCGCAAG GGCGATCTCG TGTCCGGTCA GACGCGCCCG
GCGCGCGAGA ACGAGAAGTA CGCCGCCATC CAGAAGGTCA CGGCCGTCAA CGGCACGCCC
GTCGAGGAGC TGGGCAGCCG CGTGCGCTTC GGCGACCTCA CGCCGGTCTA CCCGGACGAA
TGCCTCGTCA TGGAGCACGG CAAGAACACC GTCACCGCCC GCGTCATCGA CCTCGTGTCG
CCCATCGGCA AGGGCCAGCG CGGACTGATC GTCAGCCCCC CGAAGGCGGG CAAGACCACC
ATCCTCAAGG ACATCGCCGC CGCCATCAGC GCGAACAACC CCGAAGTGCA CCTCATGTGC
CTGCTCGTGG ACGAGCGTCC CGAGGAAGTC ACCGACATGG AGCGCTCCAT CAAGGGCGAG
GTCATCTCCT CCACGTTCGA TATGCCCACC GAGAACCACA TCGCCGTGTC CGAGCTGGTC
ATCGAGCGCG CGAAGCGCCT CGTGGAATGC GGCAAGGACG TTGTCGTGCT GCTGGACTCG
CTCACGCGCC TCGCGCGCGC CTACAACCTG GCGCAGCCGG CATCGGGCCG CATCCTGTCG
GGCGGCGTGG ACTCCACGGC GCTCTACCCG CCGAAGCGAT TCCTGGGCGC TGCGCGCAAC
ATCGAGCACG GCGGTAGCCT GACCATCCTG GCCTCAGCCC TGGTGGACAC GGGCTCGAAG
ATGGACGAGG TCATCTTCGA GGAGTTCAAG GGCACCGGCA ACATGGAGCT CAAGCTGGAT
CGCAACCTGG CCGACCGCCG CATCTTCCCG GCCATCGACC CGGTGGCGTC GGGCACCCGC
AAGGAGGATC TGCTGCTGGA GCCGCAGGAG GCGCCGCTCA TCTGGGCCGT GCGCCGCATC
CTCGCGAACA CGAACAGCAC CGAACGCGCC ATGGACATGC TGATCAAGTC GCTCAAGCAG
ACCGAGACGA ACCAGGAGTT CCTCGTGCGC ACGGCGAAGA AGGCCCAGCA CACAAAGGCC
GACGGCTCGC TGGAGTTCTA G
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| Protein sequence | MSETEATTEA PAAAPVKRRS TSVKAKTQGK AEGAATPGRN SSATRTPRKS VKAGGAQQQQ
PQGGSNNRRQ NASNAGKQNN GGSNRQKQGG GQNRQNNSQN QRRQRRQHDN NRGNREVQPS
VSREELAKLK VAELREKAAE LNLDVTGLKK AELVEAVFEA SVKAEGFIEV SGILDILADG
YGFLRTQGYL PSETDCYVGL STIRRNGLRK GDLVSGQTRP ARENEKYAAI QKVTAVNGTP
VEELGSRVRF GDLTPVYPDE CLVMEHGKNT VTARVIDLVS PIGKGQRGLI VSPPKAGKTT
ILKDIAAAIS ANNPEVHLMC LLVDERPEEV TDMERSIKGE VISSTFDMPT ENHIAVSELV
IERAKRLVEC GKDVVVLLDS LTRLARAYNL AQPASGRILS GGVDSTALYP PKRFLGAARN
IEHGGSLTIL ASALVDTGSK MDEVIFEEFK GTGNMELKLD RNLADRRIFP AIDPVASGTR
KEDLLLEPQE APLIWAVRRI LANTNSTERA MDMLIKSLKQ TETNQEFLVR TAKKAQHTKA
DGSLEF
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