Gene Elen_1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1004 
Symbol 
ID8415294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1215356 
End bp1216045 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content67% 
IMG OID645023968 
Producthypothetical protein 
Protein accessionYP_003181365 
Protein GI257790759 
COG category[S] Function unknown 
COG ID[COG2717] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.222675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGTGT TGCTGGCGAT TCTCATAAGC GTGCTGTTCG CGTGCGCGCT GCACAGGCAG 
ATCAAGCGCT ACGCCGTGTC GTTCTACATC GTGGCCGTGG CCGTCGACGT GCTGTTCCTG
TCAGGGGTGC TGTTCGGGGT CTCGCGCGAG TTCGCCGCCG CGGTGTACCC GTACCTCACG
CGGTGCCTGC TCGGGTTCGC CCTGTTCGCG CTCGTCATGT ACATCGGGGC GCTGCCCGAA
GGGTCGAAGG CGCGCCAGAT GCTCATGCCC ATCCGCGGCG AGCTGTCCAT CATCGCCGCC
ATCCTGACCG TCGGGCACGT GGCGAACTAC CTGGGCACGT ACCTGGCCGA CATCCTGTCG
GGGTTCGCCG GGATGTCGGC GGGCATGGTC GCGTCGTTCG TCGTGTCGAG CCTGCTCATC
GTGCTGCTGG CGGCGCTCAC CGTCACGTCG TTCAACGCGG TGAAAACCCG CATGAGCTCC
GACGCGTGGA AGCGCCTGCA GAAAACCGCC TACGCGTTCT TCGGGCTGAC GTACGCGCAC
CTCGTGCTGG TGCTGGCGCC CACCGTCTCG TCGAGCGGGC AGAAAGCCGC GTTCAGCATC
GCCGCGTACA CGGCGATCAT GCTGGTCTAC GTTGCGCTGC GCGCGGCGAC GCACCTGCGC
GCGAAGCGGG CGCGGCCCGC GACGCCGTAG
 
Protein sequence
MEVLLAILIS VLFACALHRQ IKRYAVSFYI VAVAVDVLFL SGVLFGVSRE FAAAVYPYLT 
RCLLGFALFA LVMYIGALPE GSKARQMLMP IRGELSIIAA ILTVGHVANY LGTYLADILS
GFAGMSAGMV ASFVVSSLLI VLLAALTVTS FNAVKTRMSS DAWKRLQKTA YAFFGLTYAH
LVLVLAPTVS SSGQKAAFSI AAYTAIMLVY VALRAATHLR AKRARPATP