Gene Elen_0602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0602 
Symbol 
ID8414892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp768782 
End bp769621 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content61% 
IMG OID645023579 
ProductSNARE associated Golgi protein 
Protein accessionYP_003180976 
Protein GI257790370 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.688276 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCA TCAATTTCTT CGTCAACCTG CTCTCGGATC CGCGGGGGGC TATCGCGGGC 
TGGATCATCG CGCTGGGGCC GCTGTGGGTG TACTCGCCGC TGTTTCTCAT CGTGTTCGTG
GAGACGGGTC TTGTGTTCTT CCCGTTTTTG CCGGGCGATT CGCTGTTGTT CGCGGCGGGC
GTGTTCTCTG CCGACGGTGG AGGGTTGAAC GTCTGGGCTA CGCTCATCGT GTTCTACGTT
GCCGCTATCT TGGGCAACAC GTCGAATTAC TGGATCGCGC GGTTCTTCGG CGCGCGCATC
ATCGATTCCG GCAAAGTGAA AGCGCTCACG CCTGAACGCA TGAGCAAGCT CGACCATTTC
TTTGCCAAAT ACGGCGGGCT CACCATCGTC ATCACGCGCT TCATGCCGTT CTTCCGCACG
TTCGCCCCGT TCATTGCGGG TACCGGCCAT ATGAACTTCG GCAAGTTCAC GCTGTTCAAC
TGCATCGGCG GCATAGCCTG GGTCAGCCTG TTCGTTTTGG TGGGATACTT CTTCGGCGGT
ATTCCGCTCG TGCAGGATCA CTTCGAGGTC ATCGTGCTGG GCATTGTCGC CGTGTCGGTG
GCTCCGGCTA TCATCGGCGC CGTCAAGGCC GCTATGAGCT CGCGCAAGAA GAAGACGGCT
GACGGACGCA CGCAGGCCCA AGCCGGGATC GATGCCGAAT TGGTCGAGGA GCTCGAGCTG
CGCGGCGCTC ATGCGGCAGT CGAAGAAGGG CTCTCCGGCA AGCATGCGGC CCCTGTCGCG
AAGGCGGTTC AGGAGATGCC GCACGGCGCT CATGCGAAGG CGGAGTCCGA AACGGAGTAG
 
Protein sequence
MDIINFFVNL LSDPRGAIAG WIIALGPLWV YSPLFLIVFV ETGLVFFPFL PGDSLLFAAG 
VFSADGGGLN VWATLIVFYV AAILGNTSNY WIARFFGARI IDSGKVKALT PERMSKLDHF
FAKYGGLTIV ITRFMPFFRT FAPFIAGTGH MNFGKFTLFN CIGGIAWVSL FVLVGYFFGG
IPLVQDHFEV IVLGIVAVSV APAIIGAVKA AMSSRKKKTA DGRTQAQAGI DAELVEELEL
RGAHAAVEEG LSGKHAAPVA KAVQEMPHGA HAKAESETE