Gene Elen_0530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0530 
Symbol 
ID8414814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp687351 
End bp688022 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content68% 
IMG OID645023501 
Productpeptidyl-prolyl cis-trans isomerase cyclophilin type 
Protein accessionYP_003180904 
Protein GI257790298 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.347724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.708181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGAA TCGTCTTGCC CGTATACACC CCGCACTACA TCCCCACCGG CGACGAGGTT 
GCCGTCATCG AGACGTCGCG CGGCACGATC CGCGTGCAGC TGGCCGGCAA GGACGCGCCC
GTGACCGTGG GCAACTTCGT CGAGCTGGCG GCGCGCGGCT TCTACGACAA GCTGAAATTT
CACGCGCACA AGCCCGGCTC CGTGGTGCTG GGCGGTTGCC CGACGACGCG CACGCTGGGG
CCGGCGCAGG TGGACGCCGC CGCGCGCGGC GTGATCCGCG GCATCCGCCC CGGCACGGGC
GACGCGCGCT ACGTCATCGT CGACGAGTGG GAAGCCAACC CGAACAACAA GCACGTGCTG
GGAAGCCTGT GCATGGCGCA CAAGTCCGAC CCGAACTCGG GCAGCTGCCA GTTCTACTTC
TCGCTGTCCG AGCAGCCCGA ATTCGACGAC AAGTTCACCG TGTTCGGCCA GACCGTCGAG
GGCCTCGACG TGGTGCAGAA GCTGACGATC GGCGACGCGA TCGTGCATAT CGGCATCGAG
GGCGCCGACG AGGAGGCGCT CGCCGAGGCG ATCTCCCACG AGCTGCCCCG CCCGAAAACC
CCGAAGGAAG TGCTCGAGGA GCTGGAGCGG GAGCGGGCCG AGCGCGAAGC GGCGGCGGCG
AAGGAAGAGT AA
 
Protein sequence
MGRIVLPVYT PHYIPTGDEV AVIETSRGTI RVQLAGKDAP VTVGNFVELA ARGFYDKLKF 
HAHKPGSVVL GGCPTTRTLG PAQVDAAARG VIRGIRPGTG DARYVIVDEW EANPNNKHVL
GSLCMAHKSD PNSGSCQFYF SLSEQPEFDD KFTVFGQTVE GLDVVQKLTI GDAIVHIGIE
GADEEALAEA ISHELPRPKT PKEVLEELER ERAEREAAAA KEE