Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_0486 |
Symbol | |
ID | 8414770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | - |
Start bp | 619319 |
End bp | 621037 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 645023457 |
Product | fumarate reductase/succinate dehydrogenase flavoprotein domain protein |
Protein accession | YP_003180860 |
Protein GI | 257790254 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.221964 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAGAAC GAACCATCAG CCGCCGCAAC TTCCTGGCGG GAATCACCGC GACGGGCGCG CTGGCCGCAG CAGGGGCGCT GGCCGGATGC GCGCCGCAAG CGCAGGCCGA AGGCGGAAAG AGCGGCAAGG CCGACGCCGA CGCTCAGGGC AGTTGGCGCG ACAAGCCGGA GATGCCCGCC GACATCGCCG AGACGCTGGA AGCCGACCTC GTGGTGGTAG GCGCCGGCAA CGGCGGGCTC GTGGCCGCCA CCACGGCCGC GCAGAACGGC GCGAAGGTCA TCGTGCTGGA AAAGGGCGGC AACATCGCCG CCGCACGCGA GGCTATCGGC GCGCTCAACT CCGCGCTGGA GCCCGACCAT GTCGAAGACG TCCCCACACT GCTAAACCAT GCGAACCAGA CCCAAGCGGG CGATGCCAAC ATGCTGCTGT ACAAAACCTG GGCCGAGAAG TCTGGCGAGA TGATCGAATG GATGAAGGAG ACGCTTGAGC CCAAGGGCAT GCTGTTCCCG TTCGAATGGC ACAAGCCCGA CGACCCTCAC GCCTACTACC CGGCCATGTG CTATAACCCC TGCATGGGCG AGTACAACCC CGACGGCCCG AACTACGGCG CGTACGCCCA CCTTGAAGTG ATGAACGAGG TGCTGGGCGA GCTGGGCGGC GAAGTCATGC TCATGACGCC CGCGAAGATG CTCGTGCAGG ACGAGTCGGG CAAAGTGTGC GGCGTCATCG CCGAGAGCAA GGACAAGGGC GTCATCCAAA TCAACGCGAA GAACGGCGTC ATCGTGTGCA CGGGCGGCTA CGGCGCGAAC GACGAGATGC TGCAGGACCT GTGCCCCGGC AACTCCAACT GGTGCGTGCT GCGCGACAGC GTCACCGAGG AGGGCGACGG CATCCGCATG GCGCTGTGGG CGGGAGCCGA GCTGGAAGCG GGCGGCGCCT GCATGATCTG GAACCGCGGC ATCATGTTCG ACGATACCGA GTTCGACGGC TCCTACCAGG GCGGCGACAT CTTCCTTCCC GGCAGCCAGC CGTTCCTCCA TGTGAACGCG AACGGCGAGC GCTTCATGAA CGAGGACCAG TGCTACCCCA TGAGCTACGC CGGCGGCGCG AACCAGCCCG GCCACTTCTC GTGGATCGTT TGGGACGGCA GCTACTGGGA AGACATCGAG CGGTTCGACA CCTGCGGCTG CTCGCGCCTG TTCCCCGCGC CGTCGGGCAC CGCGTTCAAC GCCGACGTGT ACGACTGCGA GGCCATCACG AAGGAGCACC TCGACTCATT CTGGCTGGAG CCGCGCATCG AGAGCGGCGC GCTGAAGAAG TGCGACACGC TCGACGAGCT GGCGAAGGAG ATGAAGTTCG ACGCCGACCA GACCGCCACG TTCAAGGCCA CCATCGAACG CTATAACGAA CTGGTCGCTG CAGGCGAGGA CGTCGACTTC GGCAAGCCTG CCTACCGCCT GAGCGCCGTC GACGAGCCGC CGTTCTACGC CGCGCGCATC GCCGGCGAGC TGTTGGTCAC CATCCACGGC GTGATCACGA ACGCCGACTC GCAGCCGCTG CGCAAGGACG GCAGCGTCAT CGAGGGCCTC TACGTTTGCG GCAACGACCA GGGCGGCTTC TACCCGCACA ACTATCCCAG CAACTTCACG GGCATCAACG CGGGCCGCAC CGCCACCTTC GCCCGCATCG CCGCCAAGCA CGCCCTCGGC GCAGCGTAA
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Protein sequence | MGERTISRRN FLAGITATGA LAAAGALAGC APQAQAEGGK SGKADADAQG SWRDKPEMPA DIAETLEADL VVVGAGNGGL VAATTAAQNG AKVIVLEKGG NIAAAREAIG ALNSALEPDH VEDVPTLLNH ANQTQAGDAN MLLYKTWAEK SGEMIEWMKE TLEPKGMLFP FEWHKPDDPH AYYPAMCYNP CMGEYNPDGP NYGAYAHLEV MNEVLGELGG EVMLMTPAKM LVQDESGKVC GVIAESKDKG VIQINAKNGV IVCTGGYGAN DEMLQDLCPG NSNWCVLRDS VTEEGDGIRM ALWAGAELEA GGACMIWNRG IMFDDTEFDG SYQGGDIFLP GSQPFLHVNA NGERFMNEDQ CYPMSYAGGA NQPGHFSWIV WDGSYWEDIE RFDTCGCSRL FPAPSGTAFN ADVYDCEAIT KEHLDSFWLE PRIESGALKK CDTLDELAKE MKFDADQTAT FKATIERYNE LVAAGEDVDF GKPAYRLSAV DEPPFYAARI AGELLVTIHG VITNADSQPL RKDGSVIEGL YVCGNDQGGF YPHNYPSNFT GINAGRTATF ARIAAKHALG AA
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