Gene Elen_0290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0290 
Symbol 
ID8414574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp386753 
End bp387421 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content66% 
IMG OID645023267 
ProductHAD-superfamily hydrolase, subfamily IA, variant 3 
Protein accessionYP_003180670 
Protein GI257790064 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCAT TCCGCATCGG CGTGATCTTC GATTGCGACG GGACGCTGAT CGACTCGATG 
ATGGTGTGGC GCGAGACGGA AGCCGGTTTG GCGCGGCGTG CGAACGTGAC GTTGACGGCG
GCCGAAATCG ATGCGCTCAC CGCGATGACC ATTCCCGAGT GCGGCGCGTT CTTCCACGAG
CGCTTCGGCT TGGGTTCGTC GGGTGACGAG GTGGTCGCCA TGATGGACGA GCTCATGTTG
GAGTTCTACC GCGAGCGCGC TCTGGCGCGG CCGGGAGCGC TCGAGTTCGT GCAGGCGTTG
GCCGAGCGCG GGGTGCGCAT GAGTGTGGCG TCGTCCAGCC CGCAGCCGTA CTTGCAGGCC
GGGCTTGAGC GCTGCGGGTT CGCGCCGTAC CTCGACGCCA TCGTGTCGGT TGACGACGTG
GGCGCCTCGA AGCGCGAGCC CGCTGTGTAC GATCACGCTC GCGAGGCGAT GGGCACGCCG
CTTGCCGCCA CCTGGGGCGT CGAGGACTCG GTGTACGCCG TGCGCACGCT GAAAGCCGCG
AACTACCGCA CGCTCGGCAT CTACGACTGC GATATCTCGG GCACGTGCGA GCAGCTGGCA
GCCGAGGCCG AGCGGTTCAT CACGACCTTC GAGGATTTGG ACGTCGACAC GTTCCTCGGT
TGGAACTAA
 
Protein sequence
MDAFRIGVIF DCDGTLIDSM MVWRETEAGL ARRANVTLTA AEIDALTAMT IPECGAFFHE 
RFGLGSSGDE VVAMMDELML EFYRERALAR PGALEFVQAL AERGVRMSVA SSSPQPYLQA
GLERCGFAPY LDAIVSVDDV GASKREPAVY DHAREAMGTP LAATWGVEDS VYAVRTLKAA
NYRTLGIYDC DISGTCEQLA AEAERFITTF EDLDVDTFLG WN