Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_0198 |
Symbol | |
ID | 8414482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | + |
Start bp | 278756 |
End bp | 279541 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645023178 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003180581 |
Protein GI | 257789975 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.499955 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGACG ATCTCAAGGG CAAGACGGTG GTGGTGACGG GCAGCTCGAA GGGGCTGGGC GCCGCCATGG CGCGGCGCTT CGGCGCCGAG GGCATGAACG TGGTGGCGAA CTACCGCTCC GACGAAGAGG GCGCGCGCGA AACGGTGCGA GCCATCGAGG AAGCGGGCGG AGCGGCGGCC GCGGTGCAGG CCGACGTGAG CAAGAACGAG TGCGTGGACG CCCTGTTCGA CGCTGCGATG TTCTCGTTCG GCGGCGTGGA CATCTGGGTG AACAACGCGG GCATCGAGGT GGCTTCGCCG TCCGATCGGA AGTCCATCGA GGAATGGCAG CGCGTCATCG ACGTGAACCT GACCGGCGTG TTCGCGGGCT GCCGCCGCGC CATCGATCAC TTTCTGGATC GCAAGATGCC CGGCGTCATC ATCAACCTGT CGTCGGTGCA CGAGATCATT CCGTGGCCGC ATTTCGCCGA CTATGCGGCC AGCAAGGCAG GAGTCGGCAT GCTGACGAAG ACGCTGGCGC TCGAGTACGC CGACCGCGGC ATCCGCGTGA ACGCCATCGC GCCCGGAGCC ATGAACACGC CCATCAACGC GGAGAAGTTC GCCGATCCCG AAGCGCGCGC CGCAACCGAA CGGCTCATCC CGATGGGGTA CGTGGGCGCC CCCGAAGACG TGGCCGCCGC CGCGGCCTGG CTCGCGTCCG ACCAGGCCAG CTACGTGACC GGCACCACCC TGTTCGTCGA CGGCGGCATG ACGCTGTACC CCGGCTTCCA GTTCGGGCAG GGCTAG
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Protein sequence | MYDDLKGKTV VVTGSSKGLG AAMARRFGAE GMNVVANYRS DEEGARETVR AIEEAGGAAA AVQADVSKNE CVDALFDAAM FSFGGVDIWV NNAGIEVASP SDRKSIEEWQ RVIDVNLTGV FAGCRRAIDH FLDRKMPGVI INLSSVHEII PWPHFADYAA SKAGVGMLTK TLALEYADRG IRVNAIAPGA MNTPINAEKF ADPEARAATE RLIPMGYVGA PEDVAAAAAW LASDQASYVT GTTLFVDGGM TLYPGFQFGQ G
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