Gene Elen_0089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0089 
Symbol 
ID8414371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp118023 
End bp119024 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content68% 
IMG OID645023067 
Product4-diphosphocytidyl-2C-methyl-D-erythritolkinase 
Protein accessionYP_003180472 
Protein GI257789866 
COG category[I] Lipid transport and metabolism 
COG ID[COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 
TIGRFAM ID[TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAC CGAGCAAGAA CGGCGAAAAC GCCGTAGACA TGCTGGCCGT GGCTCGCATC 
GCGCAGGGCG TGGACATCGC GGGCTTCGCC GGCCCCGATG CCGTCAAGCT GGTGGCACCG
GCGAAAGTGA ATCTGTTCCT CGACATCGGC GCGAAGCGCG CGGACGGCTA TCACGAGGCC
GTCAGCATCA TGCATGCGCT CATGCTGCAC GACGTTTTAC GCATGAAGCT GGCGCCGGGA
CGCGGAGAAG GTCTATCCGT CGATCTCTCG TGCGTTGCGC GCGAAGGGCT CGCGATGCTC
GATGTGCCCG TGGAGAGCAA CATCGTGGCG AAGGCCGTGC GCTTGCTGGC TGAAAAATTG
GGACGCACGG CTGACGAGAC GGTGGTCGCC TGCCTCGAGA AGCACATCCC CGCCGAGGCC
GGTTTGGGCG GCGGCTCCTC CGACGCCGCC GCGGCGCTGC TGGGCGCTGC GCACTTGTGG
GGCGTGCCTG CCGACGATCC GCGTATCGAG GAAGCAGCAC GAAGCCTGGG TGCCGACGTG
GCGTTCTTCC TGCATGGCGG CTGCGCTTGC TTCACGGGCG TGGGCGATGC GTTCGACCAT
GCCCTTGCGC CCATGAACGG CAACGTCGTG CTCGTGAAGC CCGAGGGCGG CGTGTCCACG
GCTGCCGCGT ACCGCGCGTT CGACGAGCAT CCCACGGCCA TTTCCGAGGC CGATCGCGAA
GCAGCCCTCG AAGCCCAGCG CGCCGCCGAC GTGCCGCTGC GCAACAACCT CGTGCCCGTT
TCCGAGCACC TGCTTCCGGC GCTCGTGGAC ATCCGCTTGT GGGCTAGCGA GCGCGCCGAC
GTGCAGCGCG TGCTCATGTC GGGCAGCGGG TCGGCCGTGT TCATGCAGTG CGCCACGTTC
GCCGATGCAG GTCGCGTGGC CGCCGAGGCG CGCATGCGCG GCTGGTGGGC GCGTGCTACC
ATGTTTGGCT CGGCGCGTGC GGCCGTGGTG CCGAACCGCT GA
 
Protein sequence
MTQPSKNGEN AVDMLAVARI AQGVDIAGFA GPDAVKLVAP AKVNLFLDIG AKRADGYHEA 
VSIMHALMLH DVLRMKLAPG RGEGLSVDLS CVAREGLAML DVPVESNIVA KAVRLLAEKL
GRTADETVVA CLEKHIPAEA GLGGGSSDAA AALLGAAHLW GVPADDPRIE EAARSLGADV
AFFLHGGCAC FTGVGDAFDH ALAPMNGNVV LVKPEGGVST AAAYRAFDEH PTAISEADRE
AALEAQRAAD VPLRNNLVPV SEHLLPALVD IRLWASERAD VQRVLMSGSG SAVFMQCATF
ADAGRVAAEA RMRGWWARAT MFGSARAAVV PNR