Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_0084 |
Symbol | |
ID | 8414365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | - |
Start bp | 110532 |
End bp | 112118 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 645023061 |
Product | Substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | YP_003180467 |
Protein GI | 257789861 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.689632 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATTCTGA CCGAAACCCT GGCCTTGCTC GTTGAAAAAC GCGATTGGTT TTTCGAGCTC CTTCTGCAGC ATATCGGCAT CTCGCTCATA TCCATTGCAC TGGCGGCGCT CATCGGACTG TCGCTGGGAA TCGCCATCGC CACATGGAGG CGAGGGGCGA AGCCCGTGCT TGCGCTGGTC AATTTCGTGT ACACCATCCC ATCCATTGCG CTGTTCGGCT TCCTCATCCC CATCACGGGC ATCGGCGACC CTACCGCCAT CGTGGCGCTC ACCGTGTACG CGCTGCTGCC GATGGTGCGC AACACCTACA CCGGCCTCAC CACCATCGAC CCTGCCATCA TCGAGGCGGC GCGCGGCATG GGCTCCACCG ACCGCCAGCT GCTGTACCGT ATCGAACTGC CGCTGGCCGC GCCCGTCATC ATGAGCGGCA TCCGCAACAT GGCCACCATG ACCATCGCGC TGGCCGGCAT CGCCACGTTC ATCGGCGCAG GCGGCTTGGG CGTGGCCATC TTCCGCGGCA TCACGACGTA CAACCTGGCC ATGACCCTGG CGGGCAGCGT GCTGATCGCG CTGCTGGCCA TCGTGGTGGA CCTGCTGCTG GGCTTAGCCG AGAAGTCCAC ACGACGCCAC CTGGAGCCTT CGAACGCCCG GCGACGGAAG CGTTCCGGCG CGCGACGGGT TTCGCGTCGC AAGCTGGCCC CGGCCGTCGC GGCGGGCGCG GCCGTGGTGC TGATAGCGGG CGGGGCCTTC GCGTTCGCGA ACCGCGGCGG CGGAGAGAAC GTGGTGAACA TCGCCACGAA GCCCATGACC GAGCAGTACA TCCTCGGCGA GATGCTGAAC ACGCTGATCG AGCACGATAC CGACCTCAAG GTGGAGCTCA CGCAGGGCGT GGGCGGCGGC ACGTCGAACA TCGAGCCCGG CATGGAGAAG GGCGACTTCG ACCTCTACCC CGAGTACACG GGAACGGGAT GGAACGCCGT CCTCAAGCAC GACGACACCT ACGACGAGTC GATGTTCGAC ACGATGCAGC AGGAATACGA ATCGCAGCTA GGCCTCACCT GGGTGGGCAT GTACGGGTTC AACAACACGT ACGGCCTCGC TGTGAGCCGC GACGCGGCCG AGCGCTACAA CCTGCGCACG TATTCTGACC TGGCGGGCGC AGCGGGCGGC CTGACGCTGG GCGCCGAGCC CGACTTCTTC GACCGGCAGG ACGGCTACCC CGGATTGCAG CAAGCCTACG GCATGAACTT CGGCACCACG AGAGACATGG ACATCAGCTT GAAGTACCAG GCGCTGTTCG AGGGCCAGGT GGATGCCATC GTCGTGTCCA CCACCGACGG GCAGGTGGCC GACGAGCGCC TCGTGGTGCT GGAGGACGAC CGGCACTTCT ATCCGTCGTA TCTTTGCGGC AACGTCGTGC GACAGGACGC GCTGGAAAAG CACCCCGAGC TGCGCGGCGA GCTGCTGAAG CTGCAAGGGG CCATCACCGA TGCCGATATG GCGCGCATGA ACAACGAAGT GGAGACGCAA GGGCAGGAGC CGAAAGCAGT GGCCGACGCG TTCCTGGCCG AGAAGGGGCT GATGTAG
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Protein sequence | MILTETLALL VEKRDWFFEL LLQHIGISLI SIALAALIGL SLGIAIATWR RGAKPVLALV NFVYTIPSIA LFGFLIPITG IGDPTAIVAL TVYALLPMVR NTYTGLTTID PAIIEAARGM GSTDRQLLYR IELPLAAPVI MSGIRNMATM TIALAGIATF IGAGGLGVAI FRGITTYNLA MTLAGSVLIA LLAIVVDLLL GLAEKSTRRH LEPSNARRRK RSGARRVSRR KLAPAVAAGA AVVLIAGGAF AFANRGGGEN VVNIATKPMT EQYILGEMLN TLIEHDTDLK VELTQGVGGG TSNIEPGMEK GDFDLYPEYT GTGWNAVLKH DDTYDESMFD TMQQEYESQL GLTWVGMYGF NNTYGLAVSR DAAERYNLRT YSDLAGAAGG LTLGAEPDFF DRQDGYPGLQ QAYGMNFGTT RDMDISLKYQ ALFEGQVDAI VVSTTDGQVA DERLVVLEDD RHFYPSYLCG NVVRQDALEK HPELRGELLK LQGAITDADM ARMNNEVETQ GQEPKAVADA FLAEKGLM
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