Gene Elen_0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0055 
Symbol 
ID8414335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp69375 
End bp69947 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content60% 
IMG OID645023031 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003180438 
Protein GI257789832 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATT TGCGCTCGGA CGAATTCATG AACCATGCCC TGCGCGATTG GGAGGACATG 
GTGTATCGTC TCGCGCTCAG CCAGACGCGC GAGCCCGCCG ACGCAAGCGA TGTGTGCCAG
GAAACGTTTA TCAGCCTGCT GAAGGACGCA ACTGTGTTCC AAGACGACGA ACACCTCAAG
GCATGGCTCA TCCGCGTGAC CATCAACCGG TGCAACCAGC TTCGCCGTAC CGCGTCGCGC
CATCGGACCC AACCTCTTCC CGATGATGAA ACGCTGCTTC CCAAAACGCC CCCGGCATCG
GCCGCGCTGA TGGCGAACGA GGTGTGGAGG GTTCTCGACA CCCTTCCGCC CAAGTATCGC
GCGGTGGTGC ATCTGCACTA TGTGGAAGGG TATTCGACCG AGGAGATCGC CGAGATCGCG
AAGTGTCGGC CCTCGACGGT GCGAAGCCGC TTGCGTCGTG CCCGCGCCCA GCTCAAGACG
TTGATAGAAC AGGAGGAATC TCATGAAGCC GTCGCCGATG GACGAGTATC GTGCTTTGAT
GGAGGAAATC GAGAGCCCGA GTACGGTGCA TGA
 
Protein sequence
MADLRSDEFM NHALRDWEDM VYRLALSQTR EPADASDVCQ ETFISLLKDA TVFQDDEHLK 
AWLIRVTINR CNQLRRTASR HRTQPLPDDE TLLPKTPPAS AALMANEVWR VLDTLPPKYR
AVVHLHYVEG YSTEEIAEIA KCRPSTVRSR LRRARAQLKT LIEQEESHEA VADGRVSCFD
GGNREPEYGA