Gene Elen_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0012 
Symbol 
ID8414289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp16015 
End bp16584 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content62% 
IMG OID645022985 
Productheat shock protein DnaJ domain protein 
Protein accessionYP_003180395 
Protein GI257789789 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00155448 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATCGAA CGGAAGCACT GCGCATTTTA GGACTGGACG ATGATGCCAC GCCCGAAGAT 
GTGAAAACCG CCTACAAGGA AACGGTGCAG ATCCTGCATC CCGACCGGTT CGCCAGCAAT
AAGAAGCTCC AAGATCGCGC GACTGAGCAG TTCAAGAACC TCCAAGAAGC ATACGACTAC
CTGACCAGCG GAAAAGGCTC GCGCACCTCC GCTCGCGATC CGCGCGCCGC TGCCGAGCGC
GCCCGCAGCT ACACGTCGTC CAACCAGGTT GAGGCGCGCA TGGCCGGCGT AGCCGCCGCA
CGCACGCAGC TGGTTAAGCA GCGCGATGTG GCGCTTGACG AGCGTCGTAA CGGCATTGCC
ATGACCGCTA TCGGCGGCAT CGTGGCGCTG ATATCCGGCC GCCGGCCGTT CGGCCTGTTC
GGTATCGTTG CCGCCATTGC AAGTGCCGCC GCTGTGTGGG GCATCGTGCA GGTCGTGTCG
TCCCAGAGAA CCATCGCCAC GCTCAACGAA CATATCGCCG AGCTCAACAA GGAAGAGCGC
CGCCTCGCCG AGGAGTTGGA CGACGTGTAA
 
Protein sequence
MNRTEALRIL GLDDDATPED VKTAYKETVQ ILHPDRFASN KKLQDRATEQ FKNLQEAYDY 
LTSGKGSRTS ARDPRAAAER ARSYTSSNQV EARMAGVAAA RTQLVKQRDV ALDERRNGIA
MTAIGGIVAL ISGRRPFGLF GIVAAIASAA AVWGIVQVVS SQRTIATLNE HIAELNKEER
RLAEELDDV