| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_0001 |
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| Symbol | |
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| ID | 8417460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Eggerthella lenta DSM 2243 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013204 |
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| Strand | + |
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| Start bp | 67 |
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| End bp | 1182 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645022973 |
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| Product | transcriptional regulator, TrmB |
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| Protein accession | YP_003180385 |
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| Protein GI | 257789779 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000656108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000000126577 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGACAACC AGATTGAAAA AGCAGATCAT CAGGATGAAA CCGCTGATGA AAACGTGGAG
CCTTTCGACT ACACGCATGT ACACGCCGTA GCGCGCATCG CGCTGTATGA CGATCTTCGC
AGCGCCCCGC GCGTGACGGA GATACACCCG GCGCCGACGG CTGAATTCAT TGAAAGCCTT
GCTTCGAAAA TTTATGAACA GGCTAAAAAC GCCGGAGGGA CCATTCCGTA CACCGTCATC
CGCGAAGTAT CGGAAAACTT CATCCACGCG CGTTTCGCCG AGGCTACCGT GTCCATCCTG
GACGAGGGCA ATACCATCCG TTTCGCCGAC CAGGGCCCGG GCATACCTTA TAAGGATCAA
GCGCAGATCC CCGGGTTCAC ATCCGCCGTG GAGCCGATGA AACACTATAT TCGCGGCGTG
GGGTCGGGCT TGCCCATCGT GAAAGAGTAC CTCGATTTCT CGCACGGCAC CATCACCATT
GAGGACAACC TGGGAACAGG CGCCGTAGTG ACCATCAGCC TACGTGCGGG CGAGGCGACC
GATATGCCGC CCGTCGACCA ATCGAGCGCG CTTCACCCTG CATCCGCGCA ACCATCGGCC
ATGGAACCCG CTTACCCGAT GCACGAGGCG CCGCAGCAGC TGCAGCAGCA GATTCCTCCC
CAGCAGCCGA TGCAGCAACC CGCCTACCCG GCGCAATACG GATACGCAAA CCCACCGTAT
CCGCAGGAAG CCGCGCCCGC ACGACCGCCT TACGGTTACG AGCCCGAACC GCAGTACGCG
CCCCCGCGCT ATGCGCAGAA TCCCTACGCG GCAGGCGCGC CCTACTATCC CCAGCACGGT
GCCCCGGCTC ATCGCGCTCA GGGCATGGAC ATGCAAGCCC AGCATGCGAT GGCGCCGCTT
ATCCCCCCGT TGTCGCAACG CGAGCGCGAC TTCCTGCCCA TCTTCCTGAG CGAAGGAGCC
CTGGGAGTAA CGGACCTGTC GCGTTTGACC GGCGTGCCGC AATCAAGCAC GTACGTGGCG
CTGTCGAAAT TAGAGGAAGC CGGGCTTATC GAGAAAACGG TCGGACAGAA GCGCATTCTG
ACCGATCTGG GATACCACGT GGCAAATTCC CTATAA
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| Protein sequence | MDNQIEKADH QDETADENVE PFDYTHVHAV ARIALYDDLR SAPRVTEIHP APTAEFIESL
ASKIYEQAKN AGGTIPYTVI REVSENFIHA RFAEATVSIL DEGNTIRFAD QGPGIPYKDQ
AQIPGFTSAV EPMKHYIRGV GSGLPIVKEY LDFSHGTITI EDNLGTGAVV TISLRAGEAT
DMPPVDQSSA LHPASAQPSA MEPAYPMHEA PQQLQQQIPP QQPMQQPAYP AQYGYANPPY
PQEAAPARPP YGYEPEPQYA PPRYAQNPYA AGAPYYPQHG APAHRAQGMD MQAQHAMAPL
IPPLSQRERD FLPIFLSEGA LGVTDLSRLT GVPQSSTYVA LSKLEEAGLI EKTVGQKRIL
TDLGYHVANS L
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