| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_4130 |
|---|
| Symbol | |
|---|
| ID | 6066193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 4556861 |
|---|
| End bp | 4557802 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641603551 |
|---|
| Product | thioesterase domain-containing protein |
|---|
| Protein accession | YP_001727054 |
|---|
| Protein GI | 170022100 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1246] N-acetylglutamate synthase and related acetyltransferases |
|---|
| TIGRFAM ID | [TIGR02447] thioesterase domain, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.480913 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATCACC TTCGGGTTCC ACAAACAGAA GAAGAATTAG AGCGTTACTA TCAGTTTCGC
TGGGAAATGT TGCGTAAGCC CCTGCATCAA CCAAAAGGTT CGGAACGCGA CGCGTGGGAT
GCGATGGCGC ATCACCAGAT GGTCGTCGAC GAGCAGGGTA ATCTGGTGGC GGTAGGCCGA
CTGTATATTA ATGCCGACAA TGAAGCGTCC ATTCGCTTTA TGGCCGTTCA TCCCGACGTG
CAGGACAAAG GGTTAGGCAC GCTGATGGCG ATGACCCTGG AGTCGGTGGC GCGTCAGGAA
GGCGTTAAGC GCGTGACCTG TAGCGCCCGT GAAGACGCGG TGGAGTTTTT CGCCAAGCTG
GGGTTTGTTA ATCAGGGAGA AATCACCACG CCAACCACCA CGCCGATTCG CCATTTTTTG
ATGATTAAGC CCGTCGCCAC TCTGGATGAC ATTCTGCATC GCGGCGACTG GTGCGCGCAG
CTGCAACAGG CGTGGTACGA ACATATCCCG CTTAGTGAAA AAATGGGCGT GCGCATTCAG
CAATATACCG GGCAAAAATT TATCACTACC ATGCCAGAAA CCGGCAATCA GAATCCGCAC
CATACGCTGT TTGCCGGGAG TTTATTCTCA CTGGCGACGC TCACCGGTTG GGGACTTATC
TGGCTGATGC TGCGTGAACG CCACCTCGGC GGAACGATTA TTCTTGCGGA TGCGCATATC
CGCTACAGCA AGCCGATTAG CGGTAAACCT CATGCGGTAG CCGACCTCGG TGCCTTAAGC
GGCGATCTCG ACCGTCTGGC GCGCGGACGA AAAGCACGGG TGCAGATGCA GGTCGAAATC
TTTGGCGACG AGACGCCGGG TGCAGTGTTT GAAGGCACGT ATATCGTTCT GCCCGCGAAG
CCATTTGGCC CGTATGAAGA GGGCGGGAAC GAAGAAGAGT AG
|
|---|
| Protein sequence | MYHLRVPQTE EELERYYQFR WEMLRKPLHQ PKGSERDAWD AMAHHQMVVD EQGNLVAVGR
LYINADNEAS IRFMAVHPDV QDKGLGTLMA MTLESVARQE GVKRVTCSAR EDAVEFFAKL
GFVNQGEITT PTTTPIRHFL MIKPVATLDD ILHRGDWCAQ LQQAWYEHIP LSEKMGVRIQ
QYTGQKFITT MPETGNQNPH HTLFAGSLFS LATLTGWGLI WLMLRERHLG GTIILADAHI
RYSKPISGKP HAVADLGALS GDLDRLARGR KARVQMQVEI FGDETPGAVF EGTYIVLPAK
PFGPYEEGGN EEE
|
|---|
| |