| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_4028 |
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| Symbol | hemE |
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| ID | 6064627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 4434468 |
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| End bp | 4435532 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641603443 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_001726954 |
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| Protein GI | 170022000 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00901601 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGAAC TTAAAAACGA TCGTTATCTG CGGGCGCTGC TGCGCCAGCC CGTTGATGTC
ACTCCAGTAT GGATGATGCG CCAGGCGGGT CGCTATCTAC CGGAATATAA AGCCACGCGC
GCCCAGGCGG GCGATTTTAT GTCGCTGTGC AAAAACGCCG AGCTGGCGTG CGAAGTGACT
TTGCAACCGC TGCGTCGCTA CCCGCTGGAT GCGGCGATCC TCTTTTCCGA TATCCTCACC
GTGCCGGACG CGATGGGGTT AGGGCTCTAT TTTGAAGCCG GAGAAGGTCC GCGTTTTACC
TCGCCAGTCA CCTGCAAAGC CGACGTCGAT AAACTGCCAA TTCCGGACCC GGAAGATGAG
CTGGGTTACG TGATGAACGC GGTGCGTACC ATTCGTCGCG AACTGAAAGG CGAAGTGCCG
CTGATTGGTT TTTCCGGCAG CCCGTGGACG CTGGCGACCT ACATGGTGGA AGGCGGCAGC
AGCAAAGCGT TCACCGTGAT CAAAAAAATG ATGTATGCCG ATCCGCAGGC GCTGCACGCT
CTACTCGATA AACTGGCGAA AAGCGTCACT TTGTATCTGA ATGCGCAGAT TAAAGCCGGT
GCTCAGGCAG TGATGATTTT CGACACCTGG GGCGGTGTGC TTACCGGGCG CGATTATCAA
CAGTTCTCGC TCTATTACAT GCATAAAATT GTTGATGGTT TACTGCGTGA AAACGACGGT
CGCCGCGTAC CGGTCACGCT GTTTACCAAA GGCGGCGGAC AGTGGCTGGA AGCGATGGCA
GAAACCGGTT GCGATGCGTT GGGCCTCGAC TGGACAACGG ATATCGCCGA TGCGCGCCGC
CGTGTGGGCA ATAAAGTCGC GTTGCAGGGT AATATGGATC CGTCGATGCT GTACGCGCCG
CCTGCCCGCA TTGAAGAAGA AGTAGCGACT ATACTTGCAG GTTTCGGTCA CGGCGAAGGT
CATGTCTTTA ACCTTGGTCA CGGCATTCAT CAGGATGTGC CGCCAGAACA TGCTGGCGTG
TTCGTGGAGG CAGTGCATCG ACTGTCTGAA CAATATCACC GCTAA
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| Protein sequence | MTELKNDRYL RALLRQPVDV TPVWMMRQAG RYLPEYKATR AQAGDFMSLC KNAELACEVT
LQPLRRYPLD AAILFSDILT VPDAMGLGLY FEAGEGPRFT SPVTCKADVD KLPIPDPEDE
LGYVMNAVRT IRRELKGEVP LIGFSGSPWT LATYMVEGGS SKAFTVIKKM MYADPQALHA
LLDKLAKSVT LYLNAQIKAG AQAVMIFDTW GGVLTGRDYQ QFSLYYMHKI VDGLLRENDG
RRVPVTLFTK GGGQWLEAMA ETGCDALGLD WTTDIADARR RVGNKVALQG NMDPSMLYAP
PARIEEEVAT ILAGFGHGEG HVFNLGHGIH QDVPPEHAGV FVEAVHRLSE QYHR
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