Gene EcolC_4005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_4005 
Symbolpgi 
ID6064558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4398516 
End bp4400165 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content52% 
IMG OID641603416 
Productglucose-6-phosphate isomerase 
Protein accessionYP_001726931 
Protein GI170021977 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0166] Glucose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.684976 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA TCAATCCAAC GCAGACCGCT GCCTGGCAGG CACTACAGAA ACACTTCGAT 
GAAATGAAAG ACGTTACGAT CGCCGATCTT TTTGCTAAAG ACGGCGATCG TTTTTCTAAG
TTCTCCGCAA CATTCGACGA TCAGATGCTG GTGGATTACT CCAAAAACCG CATCACCGAA
GAGACGCTGG CGAAATTACA GGATCTGGCG AAAGAGTGCG ATCTGGCGGG CGCGATTAAG
TCGATGTTCT CTGGCGAGAA GATCAACCGC ACTGAAAACC GCGCCGTGCT GCACGTAGCG
CTGCGTAACC GTAGCAATAC CCCGATTTTG GTTGATGGCA AAGACGTAAT GCCGGAAGTC
AACGCGGTGC TGGAGAAGAT GAAAACCTTC TCAGAAGCGA TTATTTCCGG TGAGTGGAAA
GGTTATACCG GCAAAGCAAT CACTGACGTA GTGAACATCG GGATCGGCGG TTCTGACCTC
GGCCCATACA TGGTGACCGA AGCACTGCGT CCGTACAAAA ACCACCTGAA CATGCACTTT
GTTTCTAACG TCGATGGGAC TCACATCGCT GAAGTGCTGA AAAAAGTAAA CCCGGAAACC
ACGCTGTTCC TGGTAGCATC TAAAACCTTC ACCACTCAGG AAACCATGAC CAACGCCCAT
AGCGCGCGTG ACTGGTTCCT GAAAGCGGCA GGTGATGAAA AACACGTTGC GAAACACTTC
GCTGCGCTCT CCACCAATGC CAAAGCCGTT GGCGAGTTTG GTATTGATAC TGCCAACATG
TTCGAGTTCT GGGACTGGGT TGGCGGCCGT TACTCTTTGT GGTCAGCGAT TGGCCTGTCG
ATTGTTCTCT CCATCGGCTT TGATAACTTC GTTGAACTGC TTTCTGGCGC ACACGCGATG
GACAAGCATT TCTCCACCAC GCCTGCCGAG AAAAACCTGC CTGTACTGCT GGCGCTGATT
GGCATCTGGT ACAACAATTT CTTTGGTGCG GAAACTGAAG CGATTCTGCC GTATGACCAG
TATATGCACC GTTTCGCGGC GTACTTCCAG CAGGGCAATA TGGAGTCCAA CGGTAAGTAT
GTTGACCGTA ACGGTAACGT TGTGGATTAC CAGACTGGCC CGATTATCTG GGGTGAACCA
GGCACTAACG GTCAGCACGC GTTCTACCAG CTGATCCACC AGGGAACCAA AATGGTACCG
TGCGATTTCA TCGCCCCGGC TATCACCCAT AACCCGCTCT CTGATCACCA CCAGAAACTG
CTGTCTAACT TCTTCGCCCA GACCGAAGCG CTGGCGTTTG GTAAATCCCG TGAAGTGGTT
GAGCAGGAAT ATCGCGATCA GGGTAAAGAT CCGGCAACGC TTGACTACGT GGTGCCGTTC
AAAGTGTTCG AAGGTAACCG CCCGACCAAC TCCATCCTGC TGCGCGAAAT CACTCCGTTC
AGCCTGGGGG CGTTGATTGC GCTGTATGAG CACAAAATCT TTACTCAGGG CGTGATCCTG
AACATCTTCA CCTTCGACCA GTGGGGCGTG GAGCTGGGTA AACAACTGGC AAACCGTATT
CTGCCAGAGC TGAAAGATGA TAAAGAAATC AGCAGCCACG ATAGCTCGAC CAATGGTCTG
ATTAACCGCT ATAAAGCGTG GCGCGGTTAA
 
Protein sequence
MKNINPTQTA AWQALQKHFD EMKDVTIADL FAKDGDRFSK FSATFDDQML VDYSKNRITE 
ETLAKLQDLA KECDLAGAIK SMFSGEKINR TENRAVLHVA LRNRSNTPIL VDGKDVMPEV
NAVLEKMKTF SEAIISGEWK GYTGKAITDV VNIGIGGSDL GPYMVTEALR PYKNHLNMHF
VSNVDGTHIA EVLKKVNPET TLFLVASKTF TTQETMTNAH SARDWFLKAA GDEKHVAKHF
AALSTNAKAV GEFGIDTANM FEFWDWVGGR YSLWSAIGLS IVLSIGFDNF VELLSGAHAM
DKHFSTTPAE KNLPVLLALI GIWYNNFFGA ETEAILPYDQ YMHRFAAYFQ QGNMESNGKY
VDRNGNVVDY QTGPIIWGEP GTNGQHAFYQ LIHQGTKMVP CDFIAPAITH NPLSDHHQKL
LSNFFAQTEA LAFGKSREVV EQEYRDQGKD PATLDYVVPF KVFEGNRPTN SILLREITPF
SLGALIALYE HKIFTQGVIL NIFTFDQWGV ELGKQLANRI LPELKDDKEI SSHDSSTNGL
INRYKAWRG