Gene EcolC_3994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3994 
Symbol 
ID6064539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4386010 
End bp4387125 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content55% 
IMG OID641603405 
Productmaltose/maltodextrin transporter ATP-binding protein 
Protein accessionYP_001726920 
Protein GI170021966 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.153747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.57528 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGCG TACAGCTGCA AAATGTAACG AAAGCCTGGG GCGAGGTCGT GGTATCGAAA 
GATATCAATC TCGATATCCA TGAAGGTGAA TTCGTGGTGT TTGTCGGACC GTCTGGCTGC
GGTAAATCGA CTTTACTGCG CATGATTGCC GGGCTTGAGA CGATCACCAG CGGCGACCTG
TTCATCGGTG AGAAACGGAT GAATGACACT CCGCCAGCAG AACGCGGCGT TGGTATGGTG
TTTCAGTCTT ACGCGCTCTA TCCCCACCTG TCAGTAGCAG AAAACATGTC ATTTGGCCTG
AAACTGGCTG GCGCAAAAAA AGAGGTGATT AACCAACGCG TTAACCAGGT GGCGGAAGTG
CTACAACTGG CGCATTTGCT GGATCGCAAA CCGAAAGCGC TCTCCGGTGG TCAGCGTCAG
CGTGTGGCGA TTGGCCGTAC GCTGGTGGCC GAGCCAAGCG TATTTTTGCT CGATGAACCG
CTCTCCAACC TCGATGCTGC ACTGCGTGTG CAAATGCGTA TCGAAATCTC CCGTCTGCAT
AAACGCCTGG GCCGCACAAT GATTTACGTC ACCCACGATC AGGTCGAAGC GATGACGCTG
GCCGACAAAA TCGTGGTGCT GGACGCCGGT CGCGTGGCGC AGGTTGGGAA ACCGCTGGAG
CTGTACCACT ATCCGGCAGA CCGTTTTGTC GCCGGATTTA TCGGTTCGCC AAAGATGAAC
TTCCTGCCGG TAAAAGTGAC CGCCACCGCA ATCGATCAAG TGCAGGTGGA GCTGCCGATG
CCAAATCGTC AGCAAGTCTG GCTGCCAGTT GAAAGCCGTG ATGTCCAGGT TGGAGCCAAT
ATGTCGCTGG GTATTCGCCC GGAACATCTA CTGCCGAGTG ATATCGCTGA CGTCATCCTT
GAGGGTGAAG TTCAGGTCGT CGAGCAACTC GGCAACGAAA CTCAAATCCA TATCCAGATC
CCTTCCATTC GTCAAAACCT GGTGTACCGC CAGAACGACG TGGTGTTGGT AGAAGAAGGT
GCCACATTCG CTATCGGCCT GCCGCCAGAG CGTTGCCATC TGTTCCGTGA GGATGGCACT
GCATGTCGTC GACTGCATAA GGAGCCGGGC GTTTAA
 
Protein sequence
MASVQLQNVT KAWGEVVVSK DINLDIHEGE FVVFVGPSGC GKSTLLRMIA GLETITSGDL 
FIGEKRMNDT PPAERGVGMV FQSYALYPHL SVAENMSFGL KLAGAKKEVI NQRVNQVAEV
LQLAHLLDRK PKALSGGQRQ RVAIGRTLVA EPSVFLLDEP LSNLDAALRV QMRIEISRLH
KRLGRTMIYV THDQVEAMTL ADKIVVLDAG RVAQVGKPLE LYHYPADRFV AGFIGSPKMN
FLPVKVTATA IDQVQVELPM PNRQQVWLPV ESRDVQVGAN MSLGIRPEHL LPSDIADVIL
EGEVQVVEQL GNETQIHIQI PSIRQNLVYR QNDVVLVEEG ATFAIGLPPE RCHLFREDGT
ACRRLHKEPG V