| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3956 |
|---|
| Symbol | |
|---|
| ID | 6064472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 4344038 |
|---|
| End bp | 4344604 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641603369 |
|---|
| Product | cytochrome c nitrite reductase pentaheme subunit |
|---|
| Protein accession | YP_001726884 |
|---|
| Protein GI | 170021930 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03146] cytochrome c nitrite reductase, pentaheme subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.975829 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTAT TACGTTCGTT ATTAACTGCT GGGGTGCTGG CGTCGGGCCT GTTGTGGAGC
CTGAACGGAA TTACCGCTAC CCCTGCGGCG CAGGCATCTG GTGATCGCTA CGAAGTTACC
CAGCAGCGTA ACCCGGATGC CGCCTGTCTG GACTGTCATA AGCCAGATAC CGAAGGTATG
CATGGCAAAC ATGCTTCCGT TATCAACCCG AATAACAAAC TGCCGGTCAC CTGCACCAAC
TGTCACGGCC AGCCATCACC GCAACACCGC GAAGGGGTGA AAGATGTGAT GCGCTTTAAC
GAGCCGATGT ACAAGGTTGG AGAGCAGAAC AGCGTCTGTA TGTCCTGTCA TCTGCCGGAA
CAGTTGCAAA AAGCGTTCTG GCCGCACGAT GTCCACGTAA CCAAAGTGGC GTGCGCCAGC
TGCCATTCCC TGCATCCACA GCAAGATACG ATGCAGACGT TAAGTGACAA AGGACGGATT
AAGATTTGCG TCGATTGCCA CAGCGATCAG CGCACCAATC CGAACTTTAA CCCGGCGTCT
GTTCCGTTGC TTAAGGAGCA GCCATGA
|
|---|
| Protein sequence | MSVLRSLLTA GVLASGLLWS LNGITATPAA QASGDRYEVT QQRNPDAACL DCHKPDTEGM
HGKHASVINP NNKLPVTCTN CHGQPSPQHR EGVKDVMRFN EPMYKVGEQN SVCMSCHLPE
QLQKAFWPHD VHVTKVACAS CHSLHPQQDT MQTLSDKGRI KICVDCHSDQ RTNPNFNPAS
VPLLKEQP
|
|---|
| |