Gene EcolC_3936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3936 
Symbol 
ID6064429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4320162 
End bp4320611 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content50% 
IMG OID641603349 
Productribose-5-phosphate isomerase B 
Protein accessionYP_001726864 
Protein GI170021910 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA TTGCATTTGG CTGTGATCAT GTCGGTTTCA TTTTAAAACA TGAAATAGTG 
GCACATTTAG TTGAGCGTGG CGTTGAAGTG ATTGATAAAG GAACCTGGTC GTCAGAGCGT
ACTGATTATC CACATTACGC CAGTCAAGTC GCACTGGCTG TTGCTGGCGG AGAGGTTGAT
GGCGGGATTT TGATTTGTGG TACTGGCGTC GGTATTTCGA TAGCGGCGAA CAAGTTTGCC
GGAATTCGCG CGGTTGTCTG TAGCGAACCT TATTCCGCGC AACTTTCGCG GCAGCATAAC
GACACCAACG TGCTGGCTTT TGGTTCACGA GTGGTTGGCC TCGAACTGGC AAAAATGATT
GTGGATGCGT GGCTGGGCGC ACAGTACGAA GGCGGTCGTC ATCAACAACG CGTGGAGGCG
ATTACGGCAA TAGAGCAGCG GAGAAATTGA
 
Protein sequence
MKKIAFGCDH VGFILKHEIV AHLVERGVEV IDKGTWSSER TDYPHYASQV ALAVAGGEVD 
GGILICGTGV GISIAANKFA GIRAVVCSEP YSAQLSRQHN DTNVLAFGSR VVGLELAKMI
VDAWLGAQYE GGRHQQRVEA ITAIEQRRN