Gene EcolC_3922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3922 
Symbol 
ID6064406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4309617 
End bp4310633 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content55% 
IMG OID641603335 
Productphosphonate ABC transporter, periplasmic phosphonate binding protein 
Protein accessionYP_001726850 
Protein GI170021896 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID[TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein
[TIGR03431] phosphonate ABC transporter, periplasmic phosphonate binding protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTA AGATAATTGC CTCGCTGGCC TTCACCAGCA TGTTCAGCCT CAGCACCCTG 
TTAAGCCCGG CACACGCCGA AGAGCAGGAA AAGGCGCTGA ATTTCGGCAT TATTTCAACG
GAATCACAGC AAAACCTGAA ACCGCAATGG ACGCCATTCT TACAGGATAT GGAGAAGAAG
CTGGGCGTGA AGGTGAACGC CTTCTTTGCC CCAGACTACG CAGGCATTAT CCAGGGAATG
CGCTTCAATA AAGTGGATAT CGCCTGGTAC GGCAACCTGT CGGCAATGGA AGCGGTGGAT
CGCGCCAACG GCCAGGTCTT CGCCCAGACG GTCGCGGCGG ATGGATCGCC AGGTTACTGG
AGCGTGTTGA TCGTCAACAA AGATAGTCCG ATCAACAACC TGAACGATCT GCTGGCGAAG
CGGAAAGATC TCACCTTCGG CAATGGCGAT CCTAACTCCA CCTCTGGCTT CCTCGTCCCC
GGTTACTACG TCTTCGCCAA AAACAATATC TCCGCCAGCG ACTTCAAGCG CACCGTCAAC
GCCGGGCATG AAACCAACGC GCTGGCCGTC GCCAACAAGC AGGTGGATGT GGCGACCAAC
AACACCGAAA ACCTCGACAA GCTGAAAACC TCCGCGCCGG AGAAGCTGAA AGAACTGAAA
GTGATCTGGA AATCGCCGCT GATCCCAGGC GATCCGATCG TCTGGCGTAA AAATCTTTCC
GAAACCACCA AAGACAAGAT CTACGACTTC TTTATGAATT ACGGCAAAAC GCCGGAAGAG
AAAGCGGTGC TGGAACGCCT GGGCTGGGCG CCGTTCCGCG CCTCCAGCGA CCTGCAACTG
GTGCCGATTC GCCAGCTCGC ACTGTTTAAA GAGATGCAGG GCGTGAAAAG CAATAAAGGA
CTGAATGAGC AGGACAAGCT GGCAAAAACC ACCGCGATTC AGGCGCAACT GGATGACCTG
GACCGCCTGA ACAACGCGCT AAGCGCGATG AGTTCGGTGA GTAAAGCGGT GCAGTAA
 
Protein sequence
MNAKIIASLA FTSMFSLSTL LSPAHAEEQE KALNFGIIST ESQQNLKPQW TPFLQDMEKK 
LGVKVNAFFA PDYAGIIQGM RFNKVDIAWY GNLSAMEAVD RANGQVFAQT VAADGSPGYW
SVLIVNKDSP INNLNDLLAK RKDLTFGNGD PNSTSGFLVP GYYVFAKNNI SASDFKRTVN
AGHETNALAV ANKQVDVATN NTENLDKLKT SAPEKLKELK VIWKSPLIPG DPIVWRKNLS
ETTKDKIYDF FMNYGKTPEE KAVLERLGWA PFRASSDLQL VPIRQLALFK EMQGVKSNKG
LNEQDKLAKT TAIQAQLDDL DRLNNALSAM SSVSKAVQ