| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3905 |
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| Symbol | |
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| ID | 6064381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 4287141 |
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| End bp | 4288787 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641603319 |
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| Product | tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit |
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| Protein accession | YP_001726834 |
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| Protein GI | 170021880 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAACA AACCCTTTAT CTACCAGGCA CCTTTCCCGA TGGGGAAAGA CAATACCGAA
TACTATCTAC TCACTTCCGA TTACGTTAGC GTTGCCGACT TCGACGGCGA AACCATCCTG
AAAGTGGAAC CAGAAGCCCT GACCCTGCTG GCGCAGCAAG CCTTTCACGA CGCTTCTTTC
ATGCTCCGCC CGGCACACCA GAAACAGGTC GCGGCTATTC TTCACGATCC AGAAGCCAGC
GAAAACGACA AGTACGTGGC GCTGCAATTC TTAAGAAACT CCGAAATCGC TGCCAAAGGC
GTGCTGCCGA CCTGCCAGGA TACCGGAACC GCGATCATCG TCGGTAAAAA AGGTCAGCGC
GTGTGGACCG GTGGCGGTGA TGAAGAAGCG CTGTCGAAAG GCGTCTATAA CACTTATATC
GAAGATAACC TGCGCTATTC ACAGAATGCG GCGCTGGACA TGTACAAAGA GGTCAACACC
GGCACTAACC TGCCTGCACA AATCGACCTG TACGCGGTAG ATGGCGATGA GTACAGATTC
CTTTGCGTTG CGAAAGGCGG CGGCTCTGCC AACAAAACCT ATCTCTACCA GGAAACCAAA
GCTCTGCTGA CGCCGGGTAA ACTGAAAAAC TTCCTCGTCG AGAAAATGCG TACCCTCGGT
ACCGCAGCCT GCCCGCCGTA CCATATCGCG TTTGTGATTG GCGGCACTTC TGCAGAAACC
AACCTGAAAA CCGTCAAGTT AGCAAGCGCT CACTATTACG ATGAACTGCC GACGGAAGGG
AACGAACATG GTCAGGCGTT CCGCGATGTC CAGCTGGAAC AGGAACTGCT GGAAGAGGCC
CAGAAACTCG GTCTTGGCGC GCAGTTTGGC GGTAAATACT TCGCGCACGA CATTCGCGTT
ATCCGTCTGC CACGTCACGG CGCATCCTGC CCGGTAGGCA TGGGCGTCTC CTGCTCCGCT
GACCGTAACA TTAAAGCGAA AATCAACCGC GAAGGTATCT GGATCGAAAA ACTGGAACAC
AATCCAGGCC AGTACATTCC ACAAGAACTG CGCCAGGCCG GTGAAGGCGA AGCGGTGAAA
GTTGACCTTA ACCGCCCGAT GAAAGAGATC CTCGCCCAGC TTTCTCAATA TCCGGTTTCC
ACTCGTTTGT CGCTCACCGG CACCATTATC GTGGGCCGAG ATATTGCACA CGCCAAGCTG
AAAGAGCTGA TTGACGCCGG TAAAGAACTT CCGCAGTACA TCAAAGATCA CCCGATCTAC
TACGCGGGTC CGGCGAAAAC CCCTGCCGGT TATCCATCAG GTTCACTTGG CCCAACTACC
GCAGGTCGTA TGGACTCCTA CGTGGATCTG CTGCAATCCC ACGGCGGCAG CATGATCATG
CTGGCGAAAG GTAACCGCAG TCAGCAGGTT ACCGACGCGT GCCATAAACA CGGCGGCTTC
TACCTCGGTA GTATCGGCGG TCCGGCGGCG GTACTGGCGC AGCAGAGCAT CAAGCATCTG
GAATGCGTCG CTTATCCGGA GCTGGGTATG GAAGCTATCT GGAAAATCGA AGTAGAAGAT
TTCCCGGCGT TTATCCTGGT CGATGACAAA GGTAACGACT TCTTCCAGCA GATCGTCAAC
AAACAGTGCG CGAACTGCAC TAAGTAA
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| Protein sequence | MSNKPFIYQA PFPMGKDNTE YYLLTSDYVS VADFDGETIL KVEPEALTLL AQQAFHDASF
MLRPAHQKQV AAILHDPEAS ENDKYVALQF LRNSEIAAKG VLPTCQDTGT AIIVGKKGQR
VWTGGGDEEA LSKGVYNTYI EDNLRYSQNA ALDMYKEVNT GTNLPAQIDL YAVDGDEYRF
LCVAKGGGSA NKTYLYQETK ALLTPGKLKN FLVEKMRTLG TAACPPYHIA FVIGGTSAET
NLKTVKLASA HYYDELPTEG NEHGQAFRDV QLEQELLEEA QKLGLGAQFG GKYFAHDIRV
IRLPRHGASC PVGMGVSCSA DRNIKAKINR EGIWIEKLEH NPGQYIPQEL RQAGEGEAVK
VDLNRPMKEI LAQLSQYPVS TRLSLTGTII VGRDIAHAKL KELIDAGKEL PQYIKDHPIY
YAGPAKTPAG YPSGSLGPTT AGRMDSYVDL LQSHGGSMIM LAKGNRSQQV TDACHKHGGF
YLGSIGGPAA VLAQQSIKHL ECVAYPELGM EAIWKIEVED FPAFILVDDK GNDFFQQIVN
KQCANCTK
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