Gene EcolC_3889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3889 
Symbol 
ID6064357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4267566 
End bp4268273 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content38% 
IMG OID641603303 
Producthypothetical protein 
Protein accessionYP_001726818 
Protein GI170021864 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGA TTATAGGGAA ACAATTACCT AAAAAAGATC AAGATAATGA ACATTGGGTA 
TCCATGTCAG ACCTAATGGC AGGGCTGATG ATGGTTTTTA TGTTCATATC TATTGCTTAT
ATGCACTACG TACGTATTGA AAAAGAAAAA ATTAAAGAAG TTGCCGTAGC CTACGAGAAT
GCTCAGTTAC AGATTTATAA TGCTCTGGAT ATTGAGTTTG CAAAGGATTT ACAAGACTGG
GATGCAGAGA TCGATAAACA GACTCTGGAG GTTCGATTTA AATCACCGGA TGTTTTATTT
GGCTTAGGAA GCACAGAGCT AAAACCAAAG TTTAAACTCA TTCTTGACGA CTTCTTTCCT
CGCTACCTAA AAGTTCTAGA TAATTATCAG GAACATATTA CTGAAGTCCG CATTGAAGGT
CACACAAGTA CTGACTGGAC AGGAACAACG AATCCTGATA TTGCTTATTT TAATAATATG
GCACTATCGC AAGGTCGTAC ACGTGCAGTA TTACAATACG TTTATGACAT AAAAAATATC
GCGACACACC AACAATGGGT TAAAAGTAAA TTTGCCGCAG TAGGTTATTC ATCTGCACAT
CCCATTCTTG ATAAAACCGG CAAAGAGGAC CCTAATCGCT CTCGTCGTGT CACCTTCAAA
GTTGTAACAA ATGCCGAGTT GCAGATTAGA AAGATTATTC AGGAGTAA
 
Protein sequence
MDKIIGKQLP KKDQDNEHWV SMSDLMAGLM MVFMFISIAY MHYVRIEKEK IKEVAVAYEN 
AQLQIYNALD IEFAKDLQDW DAEIDKQTLE VRFKSPDVLF GLGSTELKPK FKLILDDFFP
RYLKVLDNYQ EHITEVRIEG HTSTDWTGTT NPDIAYFNNM ALSQGRTRAV LQYVYDIKNI
ATHQQWVKSK FAAVGYSSAH PILDKTGKED PNRSRRVTFK VVTNAELQIR KIIQE