Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3885 |
Symbol | |
ID | 6064350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 4252940 |
End bp | 4255798 |
Gene Length | 2859 bp |
Protein Length | 952 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641603299 |
Product | helicase domain-containing protein |
Protein accession | YP_001726814 |
Protein GI | 170021860 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.929535 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAGC AAAATTATGC ACCTGGTATG CGGGTGGTTA TTCGTGATGC CGAATGGCGT ATTCGCCGGG CGGATGACAG TGGTGATGGT GGGTATTTGC TGACCTGCGA TGGTATTTCA GAGCTTGTGC GCGGTAAAGA AGGGTTATTT CTGACCAAAC TGGAACAAAA AGTAGAGATC CTTGATCCCG CAAAAACGCA TTTGGTGGAA GATGAATCCG CCAATTATCA GGCGGCACAG TTGTATATTG AAAGTCAGTT ACGCCAACGC GTACCGACAG ACAGTAAAGT CCATTTTGGA CATCTGGCGG CGATGGATTC CATGCCGTTT CAGCTCGATC CTACGCGGAT GGCGCTGGCA CAACCGCGTC AGCGGATACT CATTGCCGAC GCTGTCGGTC TGGGTAAAAC GCTGGAAGCG GGTATTCTGG TTTCGGAACT GATCCGTCGT GGGCGCGGAA AACGTATTCT GGTTCTGGCG GTTAAATCGA TGCTGACACA ATTCCAGAAG GAGTTCTGGA GCCGTTTTGC GATCCCATTG ACCCGCCTGG ATTCTGCTGG TTTACAAAAA GTGCGTAACC GCATCCCTAC CAACCACAAC CCGTTCCACT ATTTTGACAA GACCATTATC TCCATCGATA CGCTGAAACA AGATATTGAA TATCGTCACC ATCTGGAAAA TGCCTGGTGG GATATTATTG TCATTGATGA GGCCCATAAC GTCGCAGAAC GTGGAACCAG TTCGTTACGC AGTAAACTGG CAAAACTGCT CGCCGGGCGT AGCGATACGC TGATTATGCT TTCAGCGACG CCGCATGATG GTAAGGCTGA AAGTTTTGCC AGCCTGATGA ACATGCTTGA CCCGACGGCG ATCGCCAACC CGAAAGAGTA TGAATACGCC GACTTTGCCG ATAAAAATCT GGTTGTCCGT CGCTTCAAAA AAGACGTGAA AGATCAGATG TCCGGCGAGT TCCCCGAGCG CAATATTGTC AAACTGACTC GCCTGGCATC TGGTGCCGAA GAAGAAGCAT ACCGTCGCCT GGTTGAGAGC CAGTTCCGTG ATGATGACGA TGAACAGGCC CAGTCTAACA AAGGTCGTCT GTTCAAGATA ACCCTCGAAA AAGCGCTATT TTCCAGCCCG ATGGCGTGTG CCAGCGTAGT GGCGAATCGT CTGAAGCGTC TTGAGAGCCG TAAAGATCAT AATAGCCAGA GCCAGATCAA CGAACTGGAG TCATTGCTGT TGGCGCTGAA TAACATTGAT GCCAGCCAGT TTAGCAAATA CCAGTTGCTG CTCGACACCA TCCGAAAAGA CCTCGCCTGG AAAGCCAATA ACACGGAAGA TCGCCTGGTG ATCTTCACCG AGAGCATTAA AACGCTGGAG TTCCTCGAAC AGCAACTGCG AGCAGATCTG AAATTGAAAG ATGACCAGAT CGCCACGCTG CGCGGCGATC AGGGCGATAC GGTGTTGATG AAAACCGTAG AAGACTTTGG TAAAACGCAG TCGCCGTTGC GTCTTTTGGT TTGTTCGGAT GTGGCATCTG AAGGGATCAA CTTGCATCAC CTTAGCCACA AAATGATTCA CTTTGATATT CCGTGGTCGT TGATGGTATT CCAGCAACGT AACGGGCGTA TTGACCGCTA TGGGCAAAAA CATCAGCCTC AAATCCGCTA TCTGCTTACC GAGGCCAGCG AACCACAGAT CAATGGCGAT ATGCGCGTAC TGGAAGTGTT GATCAACAAA GACGAACAGG CGCAGAAGAA CATTGGGGAC AGTTCGGAGT TTACCGGCAA ATTTACCCAG GAAGAGGAAG AAGAGCAGGT TGCAGAGTTC ATGATGCAGG ATGATGGTGC CAGCCTGTTT GATCAACTGC TGAACAGCAA CGTCTCGGAA AGCGCCGAAC ACGATCTGTT TGGCGAAATA TGCAGTGCGG TTTCCAGCGA TGCCTCAATG GTCATCGAAA CAGACACCAG CTTGTTTGCC AGCGAACAGG CGTACTGTGA AAGAGCATTG GGTTACCTGA AAGCCAGTGG TCAAACTATC CAGTATGAAA CCTTGCCTGA TAATACCTTG TCGCTGGTGG CACCGGAGGA GTTACGCCGC CGCTTCAACC AGCTACCGCC TGAAATCGCC CCGGAGAACT GGCAGCTCTT TTTAAGTCAG GATAAAACCG TCATCACCGA CGCGATTGCA CGCGCTCGCG GTGAGCAACA TGCCTGGCCC GATGTGCAGT ATCTCTGGCA AATCAACCCG GTAGTGCAGT GGCTGGACGA TAAAATCTCT TCGGCTTTTG GTCGTCATCA GGCACCGGTT ATCCGTCTGC CATACCTGCT TGAACCCGAT GAAGATCACT TCATTCTTTC CGGGTTATTC CCGAACCGTA AATCACATCC GATGGTGAAC CCGTGGATAG TGGTGAGCTT TAACCGTGAA TCGCTAATCG GCAGTCAGCC ATTCGCTGAG TTTTTACAAC GTCATCCGCA GTTGAGTAAC AAGCTGACTA ACAGCGGCGG TAAAGATCGT AATCACCAGC GCCAGCAGGA TTTACTGGAA GCGGCTATTG CGCATGCCCG GGAGGTATTC ATCCATGATC GGAATGCGTT TGAAACGCAC ATTAACCAGC AACTGAATGA GCATCTGCAA AAGCTGGACG TTTTGCGTGG GCGGCAGTTG AGCCAACTTG AGCTGGATTT TGCCGATAAC AAACAGCAAT TGTCAGTTAA GCAGAGCCGT AAAGAGCAGA GACAACGCGA AATCGAACAC AATTTTGACA GCTATATCGA ATGGATTGAG GACACCATGA CGACTGAAAA AGAACCCTAC ATTCAGGTAA TTGCTGTTAT CACCGGAGCG GAGGGTTAA
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Protein sequence | MNKQNYAPGM RVVIRDAEWR IRRADDSGDG GYLLTCDGIS ELVRGKEGLF LTKLEQKVEI LDPAKTHLVE DESANYQAAQ LYIESQLRQR VPTDSKVHFG HLAAMDSMPF QLDPTRMALA QPRQRILIAD AVGLGKTLEA GILVSELIRR GRGKRILVLA VKSMLTQFQK EFWSRFAIPL TRLDSAGLQK VRNRIPTNHN PFHYFDKTII SIDTLKQDIE YRHHLENAWW DIIVIDEAHN VAERGTSSLR SKLAKLLAGR SDTLIMLSAT PHDGKAESFA SLMNMLDPTA IANPKEYEYA DFADKNLVVR RFKKDVKDQM SGEFPERNIV KLTRLASGAE EEAYRRLVES QFRDDDDEQA QSNKGRLFKI TLEKALFSSP MACASVVANR LKRLESRKDH NSQSQINELE SLLLALNNID ASQFSKYQLL LDTIRKDLAW KANNTEDRLV IFTESIKTLE FLEQQLRADL KLKDDQIATL RGDQGDTVLM KTVEDFGKTQ SPLRLLVCSD VASEGINLHH LSHKMIHFDI PWSLMVFQQR NGRIDRYGQK HQPQIRYLLT EASEPQINGD MRVLEVLINK DEQAQKNIGD SSEFTGKFTQ EEEEEQVAEF MMQDDGASLF DQLLNSNVSE SAEHDLFGEI CSAVSSDASM VIETDTSLFA SEQAYCERAL GYLKASGQTI QYETLPDNTL SLVAPEELRR RFNQLPPEIA PENWQLFLSQ DKTVITDAIA RARGEQHAWP DVQYLWQINP VVQWLDDKIS SAFGRHQAPV IRLPYLLEPD EDHFILSGLF PNRKSHPMVN PWIVVSFNRE SLIGSQPFAE FLQRHPQLSN KLTNSGGKDR NHQRQQDLLE AAIAHAREVF IHDRNAFETH INQQLNEHLQ KLDVLRGRQL SQLELDFADN KQQLSVKQSR KEQRQREIEH NFDSYIEWIE DTMTTEKEPY IQVIAVITGA EG
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