| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3848 |
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| Symbol | |
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| ID | 6067331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 4204927 |
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| End bp | 4205472 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641603263 |
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| Product | oligoribonuclease |
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| Protein accession | YP_001726779 |
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| Protein GI | 170021825 |
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| COG category | [A] RNA processing and modification |
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| COG ID | [COG1949] Oligoribonuclease (3'->5' exoribonuclease) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000498222 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000133205 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAGTGCCA ATGAAAACAA CCTGATTTGG ATCGATCTTG AGATGACCGG TCTGGATCCC
GAGCGCGATC GCATTATTGA GATTGCCACG CTGGTGACCG ATGCCAACCT GAATATTCTG
GCAGAAGGGC CGACCATTGC AGTACACCAG TCTGATGAAC AGCTGGCGCT GATGGATGAC
TGGAACGTGC GCACCCATAC CGCCAGCGGG CTGGTAGAGC GCGTGAAAGC GAGCACGATG
GGCGATCGGG AAGCTGAACT GGCAACGCTC GAATTTTTAA AACAGTGGGT GCCTGCGGGA
AAATCGCCGA TTTGCGGTAA CAGCATCGGT CAGGACCGTC GTTTCCTGTT TAAATACATG
CCGGAGCTGG AAGCCTACTT CCACTACCGT TATCTCGATG TCAGCACCCT GAAAGAGCTG
GCGCGCCGCT GGAAGCCGGA AATTCTGGAT GGTTTTACCA AGCAGGGGAC GCATCAGGCG
ATGGATGATA TCCGTGAATC GGTGGCGGAG CTGGCTTACT ACCGCGAGCA TTTTATCAAG
CTGTAA
|
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| Protein sequence | MSANENNLIW IDLEMTGLDP ERDRIIEIAT LVTDANLNIL AEGPTIAVHQ SDEQLALMDD
WNVRTHTASG LVERVKASTM GDREAELATL EFLKQWVPAG KSPICGNSIG QDRRFLFKYM
PELEAYFHYR YLDVSTLKEL ARRWKPEILD GFTKQGTHQA MDDIRESVAE LAYYREHFIK
L
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