| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3803 |
|---|
| Symbol | |
|---|
| ID | 6067527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 4162285 |
|---|
| End bp | 4163127 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641603216 |
|---|
| Product | xylose isomerase domain-containing protein |
|---|
| Protein accession | YP_001726735 |
|---|
| Protein GI | 170021781 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.465718 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.675861 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGATC TGTTACAACG CCCGGATTTA TTCAGTATCA ATACCGCAAC ACTGGGCTAT
AAAACGCCGC TACCCGCCAT TATTGATGCC TGCGCCGCGC GTGGTATTGG CGCGATTGCT
CCCTGGCGCA GGGAGTTGCA AGGTGAAGAT CTCCAGCAAA TCGCCCACCA GCTTGCCGCC
AGTAACATGA GCGTTTCCGG TTTGTGCCGT AGCACTTACT ACACCGCGCC GACACTGGCG
GAACGCAAAC TGGCGATTGA TGATAACCGC CGGGCGCTGG ACGACGCAGC GGTGCTTAAC
GCCGCCTGTT ATATGCAGGT GGTTGGCGGT CTGCCAACGG GCACTAAAGA TCTATATGAA
GCGCGAGAAC AAGTGAAACA AGGGATTCGC CAGTTGCTGC CACATTCGAA AGATGTCGGC
GTGCCAATTG CGCTGGAGCC ACTGCACCCG ATGACAGCTG CCGATCGCTC TTGCCTGTGC
ACGTTACGCC AGGCGCTGGA CTGGTGTGAT GAACTCGATC CCGATGGTGA GTTTGGCCTC
GGCGTGGCGG TGGATGTTTA TCACGTCTGG TGGGATCCGG ATCTCGCCAG TCAGATCCTG
CGTGCCGGAA AACGCATCCT CGCGTTTCAT GTTTCCGACT GGTTAGTGCC GACCACTGAT
CTGGTCAATG ACCGTGGTAT GCCGGGAGAT GGCGTCATCA ATATTCCGTC AATTCGTCGG
CTGGTTGAAA ACGCCGGATT TAATGGCGCT ATTGAACTGG AAATATTCTC GCCGTACTGG
TGGCAAAAAG ATATTAACAG CACGCTGGAT ATTAGCGTCG ATCGCATCGC GCATTATTGT
TAA
|
|---|
| Protein sequence | MRDLLQRPDL FSINTATLGY KTPLPAIIDA CAARGIGAIA PWRRELQGED LQQIAHQLAA
SNMSVSGLCR STYYTAPTLA ERKLAIDDNR RALDDAAVLN AACYMQVVGG LPTGTKDLYE
AREQVKQGIR QLLPHSKDVG VPIALEPLHP MTAADRSCLC TLRQALDWCD ELDPDGEFGL
GVAVDVYHVW WDPDLASQIL RAGKRILAFH VSDWLVPTTD LVNDRGMPGD GVINIPSIRR
LVENAGFNGA IELEIFSPYW WQKDINSTLD ISVDRIAHYC
|
|---|
| |