Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3678 |
Symbol | |
ID | 6065675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 4028712 |
End bp | 4029494 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641603093 |
Product | putative deoxyribonuclease YjjV |
Protein accession | YP_001726616 |
Protein GI | 170021662 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00508775 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGATTTGCC GTTTTATCGA TACCCACTGC CATTTTGATT TCCCGCCGTT TAGTGGCGAT GAAGAGGCCA GCCTGCAACG CGCGGCACAA GCGGGCGTAG GCAAGATCAT TGTTCCGGCG ACAGAGGCGG AAAATTTTGC CCGCGTGCAG GCGTTAGCGG AAAAATATCA ACCGCTGTAT GCCGCATTGG GGTTGCATCC GGGGATGTTG GAAAAACATA GCGATGTGTC TCTTGATCAG CTACAGCAGG CGCTGGAAAG GCGTCCGGCG AAGGTGGTGG CGGTGGGGGA GATCGGTCTG GATCTCTTCG GCGACGATCC GCAATTTGAG AGGCAGCAGT GGTTACTCGA CGAACAGCTG AAACTGGCGA AACGCTACGA TCTGCCGGTG ATCCTTCATT CCCGGCGTAC ACACGACAAA CTGGCGATGC ATCTTAAACG TCACGATTTA CCGTGCACTG GCGTGGTTCA CGGTTTTTCC GGCAGCCTGC AACAGGCCGA GCGGTTTGTA CAGCTGGGCT ACAAAATCGG CGTAGGCGGT ACTATCACCT ATCCACGCGC CAGTAAAACC CGCGATGTCA TCGCAAAATT ACCGCTGGCA TCGTTGTTGC TGGAAACCGA CGCGCCGGAT ATGCCGCTCA ACGGCTTTCA GGGGCAGCCT AACCGACCGG AACAGGCTGT GCGGGTGTTT GACGTGCTTT GCGAGTTGCG CCCGGAACCA GAAGATGAGA TTGCCGAAGT GTTGCTTAAT AATACGTATG CGTTGTTTAG CGTTAGTGGG TAG
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Protein sequence | MICRFIDTHC HFDFPPFSGD EEASLQRAAQ AGVGKIIVPA TEAENFARVQ ALAEKYQPLY AALGLHPGML EKHSDVSLDQ LQQALERRPA KVVAVGEIGL DLFGDDPQFE RQQWLLDEQL KLAKRYDLPV ILHSRRTHDK LAMHLKRHDL PCTGVVHGFS GSLQQAERFV QLGYKIGVGG TITYPRASKT RDVIAKLPLA SLLLETDAPD MPLNGFQGQP NRPEQAVRVF DVLCELRPEP EDEIAEVLLN NTYALFSVSG
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