| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3621 |
|---|
| Symbol | |
|---|
| ID | 6065610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 3963528 |
|---|
| End bp | 3963923 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641603039 |
|---|
| Product | DNA-binding transcriptional activator CaiF |
|---|
| Protein accession | YP_001726562 |
|---|
| Protein GI | 170021608 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.923906 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.286995 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGAAG GATATGTTGA AAAACCACTC TACTTGTTAA TCGCCGAATG GATGATGGCT
GAAAATCGGT GGGTGATAGC AAGAGAGATC TCTATTCATT TCGATATTGA ACACAGCAAG
GCGGTTAATA CCCTGACTTA TATTCTGTCG GAAGTCACAG AAATAAGCTG CGAAGTTAAG
ATGATCCCTA ATAAGCTGGA AGGGCGGGGA TGCCAGTGTC AGCGACTGGT TAAAGTGGTC
GATATCGATG AGCAAATTTA CGCGCGCCTG CGCAATAACA GTCGGGAAAA ATTAGTCGGC
GTAAGAAAGA CACCGCGTAT TCCTGCCGTT CCGCTCACGG AACTTAACCG CGAGCAGAAG
TGGCAGATGA TGTTGTCAAA GAGTATGCGT CGTTAA
|
|---|
| Protein sequence | MCEGYVEKPL YLLIAEWMMA ENRWVIAREI SIHFDIEHSK AVNTLTYILS EVTEISCEVK
MIPNKLEGRG CQCQRLVKVV DIDEQIYARL RNNSREKLVG VRKTPRIPAV PLTELNREQK
WQMMLSKSMR R
|
|---|
| |