Gene EcolC_3619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3619 
Symbol 
ID6064475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3962028 
End bp3962813 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content54% 
IMG OID641603037 
Productcarnitinyl-CoA dehydratase 
Protein accessionYP_001726560 
Protein GI170021606 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.291673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAT CATTACATCT GACCCGCAAT GGATCAATTC TGGAAATTAC CCTTGATCGT 
CCAAAAGCGA ATGCTATTGA TGCAAAAACC AGCTTTGAAA TGGGCGAAGT ATTTCTAAAT
TTCCGTGACG ATCCGCAATT ACGTGTCGCC ATTATTACCG GTGCCGGAGA GAAGTTCTTT
TCCGCGGGCT GGGATTTAAA AGCGGCAGCA GAAGGCGAAG CACCGGATGC TGACTTTGGT
CCGGGTGGTT TTGCGGGATT AACCGAAATT TTCAATCTCG ACAAACCGGT TATCGCAGCT
GTGAACGGCT ATGCCTTTGG CGGCGGCTTT GAACTGGCGC TGGCGGCAGA TTTTATTGTT
TGTGCCGATA ACGCCAGCTT CGCCCTGCCG GAAGCCAAAC TGGGTATCGT TCCTGACAGC
GGCGGCGTGC TGCGTCTGCC GAAGATCCTG CCGCCTGCCA TCGTCAATGA AATGGTGATG
ACCGGCAGAC GAATGGGCGC AGAAGAGGCG CTGCGTTGGG GGATAGTCAA CCGCGTGGTT
AGCCAGGCGG AACTGATGGA TAACGCCCGC GAACTGGCGC AGCAGCTGGT TAACAGCGCT
CCGCTGGCGA TTGCGGCGCT GAAAGAGATC TACCGCACCA CCAGCGAAAT GCCGGTAGAA
GAAGCGTATC GCTATATTCG CAGCGGCGTG TTGAAACACT ATCCATCGGT TCTGCATTCG
GAAGATGCCA TAGAAGGGCC GCTGGCGTTT GCCGAGAAGC GCGATCCGGT GTGGAAAGGA
CGTTAA
 
Protein sequence
MSESLHLTRN GSILEITLDR PKANAIDAKT SFEMGEVFLN FRDDPQLRVA IITGAGEKFF 
SAGWDLKAAA EGEAPDADFG PGGFAGLTEI FNLDKPVIAA VNGYAFGGGF ELALAADFIV
CADNASFALP EAKLGIVPDS GGVLRLPKIL PPAIVNEMVM TGRRMGAEEA LRWGIVNRVV
SQAELMDNAR ELAQQLVNSA PLAIAALKEI YRTTSEMPVE EAYRYIRSGV LKHYPSVLHS
EDAIEGPLAF AEKRDPVWKG R