Gene EcolC_3549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3549 
Symbol 
ID6067302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3880297 
End bp3880848 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content54% 
IMG OID641602966 
ProductN-acetyl-anhydromuranmyl-L-alanine amidase 
Protein accessionYP_001726490 
Protein GI170021536 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.337974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00466113 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTGTTAG AACAGGGGTG GCTGGTTGGC GCGCGCCGCG TTCCCTCACC ACATTACGAT 
TGCCGCCCGG ATGACGAAAC ACCCACCCTG CTGGTGGTGC ACAATATTAG CCTGCCGCCA
GGCGAGTTTG GCGGTCCGTG GATCGACGCA TTATTCACTG GAACTATTGA TCCGCAGGCA
CATCCTTTCT TTGCTGAGAT CGCCCATTTG CGCGTCTCCG CTCACTGTTT GATTCGCCGT
GATGGTGAAA TAGTCCAGTA TGTTCCTTTC GATAAACGTG CATGGCATGC GGGAGTCTCT
CAGTATCAGG GGCGCGAACG CTGCAATGAT TTTTCTATTG GGATTGAGCT TGAAGGCACC
GATACGCTGG CGTATACCGA TGCGCAGTAT CAACAGCTTG CGGCGGTTAC GCGGGCACTG
ATTGATTGCT ATCCGGATAT CGCTAAAAAC ATGACGGGCC ATTGTGATAT TGCGCCGGAT
CGGAAAACCG ATCCCGGTCC TGCATTTGAT TGGGCACGGT TTCGTGTGCT GGTCAGCAAG
GAGACAACAT GA
 
Protein sequence
MLLEQGWLVG ARRVPSPHYD CRPDDETPTL LVVHNISLPP GEFGGPWIDA LFTGTIDPQA 
HPFFAEIAHL RVSAHCLIRR DGEIVQYVPF DKRAWHAGVS QYQGRERCND FSIGIELEGT
DTLAYTDAQY QQLAAVTRAL IDCYPDIAKN MTGHCDIAPD RKTDPGPAFD WARFRVLVSK
ETT