| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3531 |
|---|
| Symbol | |
|---|
| ID | 6065005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 3855111 |
|---|
| End bp | 3855881 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641602948 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_001726472 |
|---|
| Protein GI | 170021518 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCATC TTTACTGGGT GGCGCTAAAA AGCATCTGGG CGAAAGAGAT CCATCGCTTT
ATGCGTATCT GGGTGCAGAC GCTAGTGCCG CCAGTCATCA CCATGACCCT TTACTTTATT
ATCTTCGGTA ACCTGATTGG TTCGCGTATT GGCGATATGC ATGGCTTCAG CTACATGCAG
TTCATCGTAC CGGGGCTGAT CATGATGTCG GTGATCACCA ACGCCTACGC TAACGTCGCG
TCATCATTTT TTGGTGCCAA GTTCCAGCGT AATATTGAAG AGCTGCTGGT AGCGCCGGTT
CCGACTCACG TCATTATTGC CGGATATGTC GGCGGTGGCG TGGCGCGTGG TCTGTTTGTT
GGCATTCTGG TGACGGCAAT TTCACTGTTT TTTGTGCCGT TTCAGGTGCA TTCATGGGTA
TTCGTTGCCT TAACGCTGGT GCTCACGGCG GTGCTATTCT CCCTTGCGGG TTTGCTGAAC
GGCGTGTTTG CCAAAACGTT CGATGACATC AGCCTGGTGC CAACCTTTGT GTTAACGCCA
CTCACGTATT TGGGCGGGGT CTTTTACTCC CTGACTTTGT TGCCGCCGTT CTGGCAAGGG
CTGTCGCACC TGAACCCAAT CGTTTATATG ATCAGTGGTT TCCGCTACGG CTTCCTTGGT
ATCAATGATG TTCCGCTGGT CACTACCTTT GGCGTACTGG TGGTCTTTAT TGTGGCGTTT
TATTTGATCT GTTGGTCGCT GATCCAACGT GGACGTGGTT TGCGTAGCTA A
|
|---|
| Protein sequence | MMHLYWVALK SIWAKEIHRF MRIWVQTLVP PVITMTLYFI IFGNLIGSRI GDMHGFSYMQ
FIVPGLIMMS VITNAYANVA SSFFGAKFQR NIEELLVAPV PTHVIIAGYV GGGVARGLFV
GILVTAISLF FVPFQVHSWV FVALTLVLTA VLFSLAGLLN GVFAKTFDDI SLVPTFVLTP
LTYLGGVFYS LTLLPPFWQG LSHLNPIVYM ISGFRYGFLG INDVPLVTTF GVLVVFIVAF
YLICWSLIQR GRGLRS
|
|---|
| |