Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3513 |
Symbol | |
ID | 6068652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 3838307 |
End bp | 3839011 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641602930 |
Product | sugar fermentation stimulation protein A |
Protein accession | YP_001726454 |
Protein GI | 170021500 |
COG category | [R] General function prediction only |
COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0325087 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTTT CTCCCCCTCT ACAGCGCGCG ACGCTAATTC AGCGTTACAA ACGTTTTTTA GCCGATGTGA TCACACCCGA TGGTCGCGAA TTAACGCTAC ACTGCCCGAA TACGGGTGCG ATGACCGGTT GTGCAACGCC TGGCGATACC GTCTGGTATT CGACTTCAGA CAACACCAAA CGGAAATACC CACACACCTG GGAATTAACT CAAAGCCAGA GCGGCGCATT TATTTGCGTC AACACGCTTT GGGCTAACAG GTTGACGAAA GAGGCTATCC TTAATGAATC AATTTCAGAA CTGTCAGGCT ATAGCTCGCT GAAAAGCGAA GTAAAATACG GCGCAGAACG CAGCCGTATT GACTTTATGT TGCAGGCGGA TTCGCGTCCA GACTGCTATA TTGAAGTGAA ATCGGTTACG TTAGCGGAGA ACGAACAGGG ATATTTTCCC GATGCGGTCA CTGAACGAGG TCAGAAACAC CTTCGGGAGT TGATGAGCGT AGCGGCTGAA GGCCAGCGTG CGGTTATCTT TTTCGCCGTG CTGCATTCAG CCATTACACG GTTTTCACCC GCGCGCCACA TCGATGAGAA ATACGCGCAA CTATTGTCAG AAGCTCAACA GAGGGGGGTA GAAATTCTGG CTTACAAAGC GGAAATTTCT GCTGAAGGCA TGGCTCTTAA AAAATCACTG CCGGTTACAT TGTAG
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Protein sequence | MEFSPPLQRA TLIQRYKRFL ADVITPDGRE LTLHCPNTGA MTGCATPGDT VWYSTSDNTK RKYPHTWELT QSQSGAFICV NTLWANRLTK EAILNESISE LSGYSSLKSE VKYGAERSRI DFMLQADSRP DCYIEVKSVT LAENEQGYFP DAVTERGQKH LRELMSVAAE GQRAVIFFAV LHSAITRFSP ARHIDEKYAQ LLSEAQQRGV EILAYKAEIS AEGMALKKSL PVTL
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