| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3506 |
|---|
| Symbol | |
|---|
| ID | 6068583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 3826349 |
|---|
| End bp | 3828331 |
|---|
| Gene Length | 1983 bp |
|---|
| Protein Length | 660 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641602923 |
|---|
| Product | iron-hydroxamate transporter permease subunit |
|---|
| Protein accession | YP_001726447 |
|---|
| Protein GI | 170021493 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000390968 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTAAAC GAATTGCGCT TTTCCCGGCG TTATTGCTGG CGCTGTTGGT GATTGTCGCT
ACGGCGCTCA CCTGGATGAA CTTCTCACAG GCGCTGCCGC GCAGTCAGTG GGCGCAGGCC
GCCTGGTCGC CGGATATTGA CGTCATCGAG CAGATGATTT TTCACTACAG CTTGTTGCCG
CGTCTGGCGA TTTCGCTGCT GGTGGGCGCG GGCCTGGGGC TGGTGGGCGT GCTGTTTCAG
CAAGTACTGC GTAACCCGCT GGCGGAACCG ACGACGTTGG GCGTTGCAAC AGGCGCGCAA
CTGGGGATTA CCGTCACCAC GCTCTGGGCG CTCCCTGGCG CGATGGCGAG CCAGTTTGCT
GCGCTGGCAG GGGCTTGTGT TGTTGGCTTA ATTGTCTTTG GCGTCGCGTG GGGGAAACGG
CTGTCGCCGG TAACGCTGAT TCTCGCGGGG TTGGTAGTGA GCCTTTATTG CGGCGCAATC
AATCAGTTAC TGGTTATCTT CCATCATGAC CAGTTGCAAA GCATGTTTCT GTGGAGCACT
GGAACGCTGA CGCAAACCGA CTGGGGCGGT GTTGAGCGTT TATGGCCGCA GTTGCTGGGC
GGTGTGATGC TGACGTTGCT GCTACTTCGT CCGTTAACCC TGATGGGGCT TGATGATGGC
GTGGCGCGCA ATCTCGGGCT GGCCTTGTCG CTTGCGCGTC TGGCGGCGCT GTCGCTGGCG
ATTGTCATCA GTGCGCTGCT GGTGAACGCT GTGGGGATTA TCGGCTTTAT CGGGTTGTTC
GCGCCGCTGC TGGCAAAAAT GCTGGGGGCG CGGCGTCTGC TGCCACGACT GATGCTGGCG
TCGTTGATTG GTGCGCTGAT CCTCTGGCTT TCCGATCAAA TCATCCTCTG GCTGACTCGC
GTGTGGATGG AAGTGTCCAC CGGTTCGGTC ACTGCGTTGA TCGGTGCGCC GCTGCTACTG
TGGCTGTTGC CGCGTTTACG CAGCATTAGC GCGCCGGATA TGAAGGTCAA CGATCGTGTC
GCGGCTGAAC GCCAACATGT GCTGGCGTTT GCCCTCGCGG GCGGCGTGCT GCTGTTGATG
GCTGTGGTGG TGGCGCTGTC GTTTGGTCGT GATGCGCACG GCTGGACGTG GGCGAGCGGG
GCGTTGCTCG AGGATTTAAT GCCCTGGCGC TGGCCGCGAA TTATGGCGGC GCTGTTTGCG
GGCGTCATGC TGGCGGTGGC GGGCTGTATT ATTCAGCGAC TGACCGGAAA CCCGATGGCA
AGCCCGGAAG TGCTGGGGAT TAGCTCCGGC GCGGCGTTTG GCGTGGTGTT GATGCTGTTT
CTGGTGCCGG GTAATGCCTT TGGCTGGCTG TTACCTGCAG GCAGTCTCGG CGCGGCGGTG
ACGCTGTTGA TCATTATGAT CGCCGCCGGC CGCGGTGGAT TTTCCCCACA CCGTATGTTA
CTGGCGGGGA TGGCGTTAAG CACCGCGTTC ACCATGCTTT TGATGATGTT GCAGGCAAGT
GGTGACCCGC GAATGGCGCA AGTGCTGACC TGGATTTCCG GTTCGACCTA CAACGCGACC
GATGCGCAGG TCTGGCGCAC CGGAATTGTG ATGGTGATTT TGCTGGCGAT TACCCCGCTG
TGCCGCCGCT GGCTGACCAT TTTACCGCTG GGTGGTGATA CCGCCCGAGC CGTAGGAATG
GCGCTGACGC CGACGCGAAT TGCGCTGCTG CTGTTAGCGG CTTGCCTGAC GGCGACCGCG
ACGATGACTA TTGGACCGTT GAGTTTTGTT GGTTTAATGG CACCGCATAT TGCGCGGATG
ATGGGTTTTC GACGGACGAT GCCACACATC GTAATTTCGG CGCTGGTGGG TGGTTTACTG
CTGGTGTTCG CTGACTGGTG TGGGCGGATG GTGCTGTTTC CGTTCCAGAT CCCGGCGGGG
CTGCTGTCGA CCTTTATCGG CGCGCCATAT TTTATCTATT TGCTGAGAAA GCAGAGCCGT
TAA
|
|---|
| Protein sequence | MSKRIALFPA LLLALLVIVA TALTWMNFSQ ALPRSQWAQA AWSPDIDVIE QMIFHYSLLP
RLAISLLVGA GLGLVGVLFQ QVLRNPLAEP TTLGVATGAQ LGITVTTLWA LPGAMASQFA
ALAGACVVGL IVFGVAWGKR LSPVTLILAG LVVSLYCGAI NQLLVIFHHD QLQSMFLWST
GTLTQTDWGG VERLWPQLLG GVMLTLLLLR PLTLMGLDDG VARNLGLALS LARLAALSLA
IVISALLVNA VGIIGFIGLF APLLAKMLGA RRLLPRLMLA SLIGALILWL SDQIILWLTR
VWMEVSTGSV TALIGAPLLL WLLPRLRSIS APDMKVNDRV AAERQHVLAF ALAGGVLLLM
AVVVALSFGR DAHGWTWASG ALLEDLMPWR WPRIMAALFA GVMLAVAGCI IQRLTGNPMA
SPEVLGISSG AAFGVVLMLF LVPGNAFGWL LPAGSLGAAV TLLIIMIAAG RGGFSPHRML
LAGMALSTAF TMLLMMLQAS GDPRMAQVLT WISGSTYNAT DAQVWRTGIV MVILLAITPL
CRRWLTILPL GGDTARAVGM ALTPTRIALL LLAACLTATA TMTIGPLSFV GLMAPHIARM
MGFRRTMPHI VISALVGGLL LVFADWCGRM VLFPFQIPAG LLSTFIGAPY FIYLLRKQSR
|
|---|
| |