| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3478 |
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| Symbol | lpxB |
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| ID | 6068300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 3795297 |
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| End bp | 3796445 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641602894 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_001726419 |
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| Protein GI | 170021465 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00171417 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0362862 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGAAC AGCGTCCATT AACGATTGCC CTGGTCGCCG GAGAAACCTC CGGCGATATC
CTGGGGGCCG GTTTAATCCG CGCTCTGAAA GAACGTGTGC CCAACGCCCG CTTTGTTGGC
GTTGCCGGGC CACGAATGCA GGCTGAAGGC TGCGAAGCCT GGTACGAAAT GGAAGAACTG
GCGGTGATGG GCATTGTTGA AGTGCTCGGT CGTCTGCGTC GCTTACTGCA TATTCGTGCC
GATCTGACAA AGCGTTTTGG CGAACTGAAG CCAGATGTTT TTGTTGGTAT TGATGCGCCC
GACTTCAATA TTACTCTTGA AGGTAACCTC AAAAAGCAGG GTATCAAAAC CATTCATTAC
GTCAGTCCAT CCGTCTGGGC GTGGCGACAG AAACGCGTTT TCAAAATAGG CAGAGCCACC
GATCTGGTGC TCGCATTTCT GCCTTTCGAA AAAGCGTTTT ATGACAAATA CAATGTACCG
TGCCGCTTTA TCGGTCATAC CATGGCTGAT GCCATGCCGT TAGATCCAGA TAAAAATGGT
GCCCGTGATG TGCTGGGGAT CCCTTACGAT GCCCACTGTC TGGCATTGTT GCCGGGCAGC
CGTGGTGCAG AAGTCGAAAT GCTTAGTGCC GATTTCCTGA AAACTGCCCA GCTTTTGCGC
CAGACATATC CGGATCTCGA AATCGTGGTG CCGCTGGTGA ATGCCAAACG CCGCGAGCAG
TTTGAACGCA TCAAAGCTGA AGTCGCGCCA GATCTGTCGG TTCATTTGCT GGATGGAATG
GGCCGTGAGG CGATGGTCGC CAGCGATGCG GCACTACTGG CGTCGGGGAC GGCAGCCCTG
GAGTGTATGC TGGCGAAATG CCCGATGGTG GTGGGATATC GCATGAAGCC TTTTACCTTC
TGGTTGGCGA AGCGGCTGGT GAAAACTGAT TATGTCTCGC TGCCAAATCT GCTGGCGGGC
AGAGAGTTAG TCAAAGAGTT ATTGCAGGAA GAGTGTGAGC CGCAAAAACT GGCTGCGGCG
CTGTTACCGC TGTTGGCGAA CGGGAAAACC AGCCACGCGA TGCACGATAC CTTCCGTGAA
CTGCATCAGC AGATCCGCTG CAATGCCGAT GAGCAGGCGG CACAAGCCGT TCTGGAGTTA
GCACAATGA
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| Protein sequence | MTEQRPLTIA LVAGETSGDI LGAGLIRALK ERVPNARFVG VAGPRMQAEG CEAWYEMEEL
AVMGIVEVLG RLRRLLHIRA DLTKRFGELK PDVFVGIDAP DFNITLEGNL KKQGIKTIHY
VSPSVWAWRQ KRVFKIGRAT DLVLAFLPFE KAFYDKYNVP CRFIGHTMAD AMPLDPDKNG
ARDVLGIPYD AHCLALLPGS RGAEVEMLSA DFLKTAQLLR QTYPDLEIVV PLVNAKRREQ
FERIKAEVAP DLSVHLLDGM GREAMVASDA ALLASGTAAL ECMLAKCPMV VGYRMKPFTF
WLAKRLVKTD YVSLPNLLAG RELVKELLQE ECEPQKLAAA LLPLLANGKT SHAMHDTFRE
LHQQIRCNAD EQAAQAVLEL AQ
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