Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3422 |
Symbol | |
ID | 6067821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 3738791 |
End bp | 3741937 |
Gene Length | 3147 bp |
Protein Length | 1048 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641602834 |
Product | CzcA family heavy metal efflux protein |
Protein accession | YP_001726366 |
Protein GI | 170021412 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.380989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAAT GGATTATCCG GCGCTCTGTC GCCAACCGTT TCCTGGTCAT GATGGGCGCA CTGTTTCTCA GCATCTGGGG CACATGGACG ATAATTAACA CGCCGGTCGA TGCGCTGCCT GACCTGTCAG ATGTGCAGGT CATTATTAAA ACCAGCTATC CCGGACAGGC CCCGCAGATT GTAGAAAACC AGGTCACCTA TCCGCTTACC ACCACCATGC TGTCCGTACC TGGCGCAAAA ACCGTGCGTG GCTTTTCACA GTTCGGTGAT TCGTATGTGT ATGTCATTTT TGAAGACGGC ACCGATCTGT ACTGGGCCCG TTCGCGCGTG CTGGAATACC TGAATCAGGT TCAGGGCAAA CTGCCTGCGG GTGTGAGCTC TGAAATCGGC CCGGACGCCA CGGGAGTGGG CTGGATATTT GAATATGCCC TGGTCGATCG CAGCGGAAAA CACGACCTTT CAGAACTGCG TTCTCTGCAG GACTGGTTTC TGAAATTTGA ACTGAAGACC ATCCCGAACG TGGCTGAGGT AGCCTCGGTC GGTGGCGTGG TGAAGCAGTA CCAGATTCAG GTCAATCCGG TAAAACTGTC CCAGTATGGG ATCAGCCTGC CCGAAGTGAA ACAGGCTCTT GAATCATCTA ACCAGGAAGC CGGTGGTTCA TCCGTTGAAA TAGCCGAAGC GGAGTATATG GTCCGCGCCA GCGGCTATCT GCAGAGCATT GATGATTTTA ATAACATCGT CCTGAAAACA GGCGAGAACG GCGTGCCGGT TTATCTGCGG GATGTTGCCC GCGTGCAGAC CGGGCCTGAA ATGCGGCGTG GTATTGCCGA ACTGAACGGC CAGGGGGAAG TTGCTGGCGG CGTGGTGATC CTGCGGTCGG GTAAAAATGC GCGCGACGTT ATCACAGCAG TCAAGGATAA ACTGGACACG CTGAAGGCCA GTCTGCCGGA AGGCGTTGAA ATCGTGACCA CCTACGATCG CAGCCAGTTA ATCGACCGGG CGATTGATAA CCTCAGTTCC AAACTTCTGG AAGAGTTTTT CGTGGTGGCC ATCGTCTGTG CCCTGTTCCT GTGGCACGTA CGTTCTGCCC TGGTGGCGAT TATCTCTCTG CCGCTTGGCC TGTGTATCGC CTTTATCGTC ATGCACTTCC AGGGACTAAA CGCCAATATC ATGTCGCTGG GAGGGATAGC TATTGCCGTC GGTGCGATGG TGGATGCCGC CATTGTGATG ATTGAGAATG CGCATAAACG GCTTGAGGAG TGGGATCATC AGCATCCGGG TGAGCAGATT GACAACGCCA CCCGCTGGAA GGTGATTACC GACGCCTCCG TGGAAGTGGG ACCCGCACTG TTTATCAGCC TGCTGATCAT CACCCTGTCC TTTATTCCTA TCTTTACCCT GGAAGGTCAG GAAGGACGTC TGTTTGGCCC GCTGGCATTC ACGAAAACGT ACTCCATGGC GGGAGCGGCC GCGCTGGCCA TCATTGTCAT TCCGATCTTG ATGGGATTCT GGATCCGGGG AAAAATTCCT GCCGAGACCA GTAACCCCCT GAACCGGGTG CTGATCAAAG CGTATCATCC ATTGCTGCTG CGGGTCCTCC ATTGGCCAAA AACAACCCTG CTGGTTGCGG CCTTGTCCAT TTTCACCGTT ATATGGCCAT TGAGTCAGGT GGGGGGGGAG TTTCTGCCGA AGATCAATGA GGGCGACCTG CTGTATATGC CATCAACATT GCCTGGCGTC TCTCCGGCAG AAGCTGCAGC ACTCCTGCAG ACGACGGACA AGTTAATCAA AAGCGTTCCT GAAGTGGCCT CTGTATTTGG CAAGACCGGT AAAGCAGAGA CCGCAACGGA TTCCGCACCG CTTGAAATGG TGGAAACCAC GATTCAGCTC AAACCTGAGG ATCAGTGGCG TCCAGGCATG ACGATTGACA AGATTATTGA AGAACTCGAC AGGACCGTCC GTTTACCGGG TCTGGCCAAC CTCTGGGTAC CGCCTATCCG TAACCGTATT GATATGCTCT CAACCGGCAT TAAAAGTCCG ATAGGTATTA AGGTATCGGG TACTGTTCTG TCGGATATCG ATGTAACAGC ACAGAGTATC GAAGCAGTCG CTAAAACCGT ACCTGGTGTG GTTTCCGCAC TGGCTGAACG ACTGGAAGGT GGACGTTATA TTGATGTGGA CATTAACCGG GAAAAAGCTT CCCGGTACGG GATGACTGTG GGCGACGTCC AGCTGTTCGT CTCTTCAGCA ATCGGTGGGG CTATGGTGGG TGAGACGGTT GAAGGCGTGG CCCGGTACCC TATTAACATT CGCTATCCGC AGGATTACCG TAACAGTCCG CAGGCGTTGA GAGAGATGCC AATCCTGACC CCAATGAAGC AGCAAATTAC GCTGGGCGAT GTTGCCGATA TTAAGGTCGT TTCCGGACCA ACCATGCTGA AAACCGAAAA TGCCCGGCCA GCCAGCTGGA TTTATGTTGA TGCCCGCGGC AGGGACATGG TGTCGGTGGT GAACGATATT AAGACGGCCA TCAGTGAGAA AGTGAAACTG AGACCGGGGA CCAGTGTGGC ATTCTCAGGA CAGTTTGAAT TACTCGAGCA CGCCAATAAG AAATTAAAAC TGATGGTACC GATGACGGTG ATGATCATCT TCATCCTGTT ATATCTGGCA TTCCGCAGGG TTGATGAAGC CCTGTTGATC CTGATGAGCC TGCCGTTTGC CCTGGTTGGC GGGATATGGT TCCTGTACTG GCAGGGCTTC CATATGTCAG TGGCGACCGG AACCGGGTTT ATCGCCCTGG CCGGGGTGGC AGCAGAGTTT GGCGTGGTCA TGCTGATGTA TCTGCGTCAT GCCATTGAAG CGCACCCGGA ATTGTCCCGT AAAGAGACGT TCACACCGGA AGGCCTTGAT GAAGCCCTCT ATCATGGTGC CGTACTGCGT GTCCGGCCGA AAGCCATGAC CGTGGCGGTG ATCATTGCGG GTCTGCTGCC AATACTCTGG GGAACCGGTG CAGGTTCAGA AGTCATGAGC CGTATCGCGG CACCCATGAT TGGTGGGATG ATCACGGCTC CGCTGCTGTC CCTGTTCATT ATTCCTGCCG CCTACAAATT AATCTGGCTG CGCAAACATA AAAAAAGCGT GTCCTGA
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Protein sequence | MIEWIIRRSV ANRFLVMMGA LFLSIWGTWT IINTPVDALP DLSDVQVIIK TSYPGQAPQI VENQVTYPLT TTMLSVPGAK TVRGFSQFGD SYVYVIFEDG TDLYWARSRV LEYLNQVQGK LPAGVSSEIG PDATGVGWIF EYALVDRSGK HDLSELRSLQ DWFLKFELKT IPNVAEVASV GGVVKQYQIQ VNPVKLSQYG ISLPEVKQAL ESSNQEAGGS SVEIAEAEYM VRASGYLQSI DDFNNIVLKT GENGVPVYLR DVARVQTGPE MRRGIAELNG QGEVAGGVVI LRSGKNARDV ITAVKDKLDT LKASLPEGVE IVTTYDRSQL IDRAIDNLSS KLLEEFFVVA IVCALFLWHV RSALVAIISL PLGLCIAFIV MHFQGLNANI MSLGGIAIAV GAMVDAAIVM IENAHKRLEE WDHQHPGEQI DNATRWKVIT DASVEVGPAL FISLLIITLS FIPIFTLEGQ EGRLFGPLAF TKTYSMAGAA ALAIIVIPIL MGFWIRGKIP AETSNPLNRV LIKAYHPLLL RVLHWPKTTL LVAALSIFTV IWPLSQVGGE FLPKINEGDL LYMPSTLPGV SPAEAAALLQ TTDKLIKSVP EVASVFGKTG KAETATDSAP LEMVETTIQL KPEDQWRPGM TIDKIIEELD RTVRLPGLAN LWVPPIRNRI DMLSTGIKSP IGIKVSGTVL SDIDVTAQSI EAVAKTVPGV VSALAERLEG GRYIDVDINR EKASRYGMTV GDVQLFVSSA IGGAMVGETV EGVARYPINI RYPQDYRNSP QALREMPILT PMKQQITLGD VADIKVVSGP TMLKTENARP ASWIYVDARG RDMVSVVNDI KTAISEKVKL RPGTSVAFSG QFELLEHANK KLKLMVPMTV MIIFILLYLA FRRVDEALLI LMSLPFALVG GIWFLYWQGF HMSVATGTGF IALAGVAAEF GVVMLMYLRH AIEAHPELSR KETFTPEGLD EALYHGAVLR VRPKAMTVAV IIAGLLPILW GTGAGSEVMS RIAAPMIGGM ITAPLLSLFI IPAAYKLIWL RKHKKSVS
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