| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3412 |
|---|
| Symbol | |
|---|
| ID | 6067738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 3728906 |
|---|
| End bp | 3729586 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641602824 |
|---|
| Product | two component heavy metal response transcriptional regulator |
|---|
| Protein accession | YP_001726356 |
|---|
| Protein GI | 170021402 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGCA TTTTAATCGT TGAAGACGAA CAAAAAACAG GTCGTTACCT GCAGCAGGGA
CTGGTTGAGG AAGGCTATCA GGCCGATCTC TTTAATAATG GCCGCGATGG TCTCGGGGCC
GCGTCGAAGG GACAGTATGA TTTGATAATA CTGGACGTGA TGCTGCCTTT CCTCGACGGG
TGGCAAATCA TCAGCGCACT GAGGGAGTCC GGGCACGAAG AACCGGTCCT GTTTTTAACC
GCAAAGGACA ACGTGCGGGA CAAAGTGAAA GGACTGGAGC TTGGCGCAGA TGACTACCTG
ATTAAGCCCT TTGATTTTAC GGAGCTGGTT GCACGTGTAA GAACCCTACT GCGCCGGGCA
CGCTCGCAGG CCGCAACAGT CTGCACCATC GCCGATATGA CCGTTGATAT GGTGCGCCGG
ACCGTGATCC GTTCGGGGAA GAAGATCCAT CTCACCGGTA AAGAATACGT TCTGCTTGAG
TTGCTGCTGC AACGCACCGG AGAAGTGTTA CCCAGGAGTC TTATCTCGTC CCTGGTCTGG
AACATGAATT TTGACAGTGA TACGAATGTG ATTGATGTCG CCGTGAGACG TCTGAGAAGT
AAAATTGATG ATGACTTTGA GCCAAAACTG ATCCATACCG TTCGCGGTGC CGGATATGTC
CTGGAGATCA GAGAAGAGTG A
|
|---|
| Protein sequence | MQRILIVEDE QKTGRYLQQG LVEEGYQADL FNNGRDGLGA ASKGQYDLII LDVMLPFLDG
WQIISALRES GHEEPVLFLT AKDNVRDKVK GLELGADDYL IKPFDFTELV ARVRTLLRRA
RSQAATVCTI ADMTVDMVRR TVIRSGKKIH LTGKEYVLLE LLLQRTGEVL PRSLISSLVW
NMNFDSDTNV IDVAVRRLRS KIDDDFEPKL IHTVRGAGYV LEIREE
|
|---|
| |