Gene EcolC_3411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3411 
Symbol 
ID6067733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3727509 
End bp3728909 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content47% 
IMG OID641602823 
Productheavy metal sensor signal transduction histidine kinase 
Protein accessionYP_001726355 
Protein GI170021401 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01386] heavy metal sensor kinase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.648729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGTTCA AAATTTCCCT GACCACACGC CTGAGCCTGA TTTTTTCTGC GGTGATGCTT 
ACGGTATGGT GGTTATCAAG TTTTATCCTG ATTAGCACCC TTAATGGCTA TTTCGATAAT
CAGGACCGCG ATTTTCTGAC AGGTAAACTT CAGCTCACCG AAGAGTTTCT TAAAACAGAG
ACGTTCCGGA ACAAAACGGA TATTAAGTCA TTATCAGAAA AAATAAACGA TGCGATGGTA
GGGCACAATG GTTTATTCAT TTCTATAAAA AACATGGAAA ATGAAAAAAT TGTTGAACTC
TATGCCAAAA ATTCTGTTGT TCCAGCGGTC CTGCTTAATA AGTCGGGTGA TATTCTCGAC
TATATGATCC AGACGGAAGA AAATAACACC GTGTACCGCA GTATCTCGCG GCGGGTTGCC
GTGACGCCGG AACAGGGTAA AAGCAAACAT GTCATCATTA CGGTTGCCAC GGATACTGGG
TATCACACCC TGTTTATGGA CAAACTCAGT ACCTGGCTGT TCTGGTTCAA TATCGGTCTG
GTCTTTATTT CTGTTTTTCT GGGCTGGCTG ACCACACGTA TTGGTCTGAA ACCGTTACGG
GAAATGACCA GTCTGGCTTC CTCCATGACT GTACACAGCC TGGATCAGCG TCTAAATCCC
GATCTGGCTC CGCCGGAAAT CTCTGAGACC ATGCAGGAGT TCAATAATAT GTTTGATCGC
CTGGAGGGGG CATTCCGGAA ACTGTCAGAT TTCTCGTCTG ACATCGCGCA TGAGCTGCGC
ACACCAGTCA GTAATCTGAT GATGCAGACG CAGTTTGCAC TGGCTAAGGA AAGGGATGTT
TCGCATTACC GCGAAATTTT ATTCGCTAAC CTGGAAGAAC TGAAAAGGTT GTCACGAATG
ACCAGTGACA TGCTTTTTCT GGCACGTTCA GAGCATGGTC TGCTGCGGCT GGATAAACAT
GATGTGGATC TGGCAGCCGA ACTGAATGAA TTACGTGAGT TGTTCGAGCC CCTGGCAGAC
GAAACAGGAA AGACAATCAC GGTTGAAGGA GAGGGCGTTG TTGCCGGAGA CAGCGATATG
CTCCGACGTG CTTTCAGTAA CCTGCTTTCC AATGCAATCA AATATTCTCC CGATAACACC
TGTACAGCGA TACACCTTGA GCGTGACAGT GACTGTGTGA ACGTGATGAT TACGAATACG
ATGTCCGGCC AAGTTCCCGC TAATCTGGAA CGTTTGTTTG ACCGGTTCTA TCGCGCAGAC
TCATCAAGGT TCTACAACAC GGAAGGCGCG GGGCTGGGAT TATCAATTAC AAGGTCAATC
ATTCATGCTC ACGGCGGCGA GCTGTCAGCA GAACAGCAGG GGCGGGAAAT TGTGTTCAAA
GTGCGCCTGT TAATGGATTA A
 
Protein sequence
MRFKISLTTR LSLIFSAVML TVWWLSSFIL ISTLNGYFDN QDRDFLTGKL QLTEEFLKTE 
TFRNKTDIKS LSEKINDAMV GHNGLFISIK NMENEKIVEL YAKNSVVPAV LLNKSGDILD
YMIQTEENNT VYRSISRRVA VTPEQGKSKH VIITVATDTG YHTLFMDKLS TWLFWFNIGL
VFISVFLGWL TTRIGLKPLR EMTSLASSMT VHSLDQRLNP DLAPPEISET MQEFNNMFDR
LEGAFRKLSD FSSDIAHELR TPVSNLMMQT QFALAKERDV SHYREILFAN LEELKRLSRM
TSDMLFLARS EHGLLRLDKH DVDLAAELNE LRELFEPLAD ETGKTITVEG EGVVAGDSDM
LRRAFSNLLS NAIKYSPDNT CTAIHLERDS DCVNVMITNT MSGQVPANLE RLFDRFYRAD
SSRFYNTEGA GLGLSITRSI IHAHGGELSA EQQGREIVFK VRLLMD