Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3273 |
Symbol | |
ID | 6065774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 3582158 |
End bp | 3583171 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641602688 |
Product | 4-hydroxy-2-ketovalerate aldolase |
Protein accession | YP_001726222 |
Protein GI | 170021268 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR03217] 4-hydroxy-2-oxovalerate aldolase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.651413 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGGTA AAAAACTTTA TATCTCGGAC GTCACATTGC GTGACGGTAT GCACGCCATT CGTCATCAGT ATTCGCTGGA AAACGTTCGC CAGATTGCCA AAGCACTGGA CGATGCCCGC GTGGATTCGA TTGAAGTGGC CCACGGCGAC GGTTTGCAAG GTTCCAGCTT TAACTATGGT TTCGGCGCAC ATAGCGACCT TGAATGGATT GAAGCGGCGG CGGATGTGGT GAAGCACGCC AAAATCGCGA CGTTGTTGCT GCCAGGAATC GGCACTATTC ACGATCTGAA AAATGCCTGG CAGGCTGGCG CGCGGGTGGT TCGTGTGGCA ACGCACTGTA CCGAAGCTGA TGTTTCCGCC CAGCATATTC AGTATGCCCG CGAGCTCGGA ATGGACACCG TTGGTTTTCT GATGATGAGC CATATGACCA CGCCGGAGAA TCTCGCCAAG CAGGCAAAGC TGATGGAAGG CTACGGTGCG ACCTGTATTT ATGTGGTGGA TTCTGGCGGT GCGATGAACA TGAGCGATAT CCGTGACCGT TTCCGCGCCC TGAAAGCAGA GCTGAAACCA GAAACGCAAA CTGGCATGCA CGCTCACCAT AACCTGAGTC TTGGCGTGGC GAACTCTATC GCGGCGGTGG AAGAGGGCTG CGACCGAATC GACGCCAGCC TCGCGGGAAT GGGCGCGGGC GCAGGTAACG CACCGCTGGA AGTGTTTATT GCCGCCGCGG ATAAACTGGG CTGGCAGCAT GGGACCGATC TCTATGCGTT AATGGATGCC GCCGACGACC TGGTGCGTCC GTTGCAGGAT CGACCGGTAC GAGTCGATCG CGAAACGCTG GCGCTGGGAT ACGCTGGTGT TTACTCGAGC TTCCTGCGTC ACTGTGAAAC GGCGGCGGCG CGTTATGGCT TAAGTGCGGT GGATATTCTC GTTGAGCTGG GCAAACGCCG GATGGTTGGC GGCCAGGAGG ATATGATCGT TGACGTGGCG CTGGATCTGC GCAACAACAA ATAA
|
Protein sequence | MNGKKLYISD VTLRDGMHAI RHQYSLENVR QIAKALDDAR VDSIEVAHGD GLQGSSFNYG FGAHSDLEWI EAAADVVKHA KIATLLLPGI GTIHDLKNAW QAGARVVRVA THCTEADVSA QHIQYARELG MDTVGFLMMS HMTTPENLAK QAKLMEGYGA TCIYVVDSGG AMNMSDIRDR FRALKAELKP ETQTGMHAHH NLSLGVANSI AAVEEGCDRI DASLAGMGAG AGNAPLEVFI AAADKLGWQH GTDLYALMDA ADDLVRPLQD RPVRVDRETL ALGYAGVYSS FLRHCETAAA RYGLSAVDIL VELGKRRMVG GQEDMIVDVA LDLRNNK
|
| |