Gene EcolC_3226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3226 
SymbolyajC 
ID6064945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3532027 
End bp3532359 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content50% 
IMG OID641602641 
Productpreprotein translocase subunit YajC 
Protein accessionYP_001726175 
Protein GI170021221 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000105955 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCTTTT TTATTTCTGA TGCGGTAGCG GCAACGGGTG CACCGGCGCA AGGTAGCCCG 
ATGTCTTTGA TTTTGATGCT GGTGGTATTC GGTCTGATTT TCTATTTCAT GATCCTGCGT
CCACAGCAGA AGCGCACCAA AGAACACAAA AAGCTGATGG ACTCCATTGC CAAAGGTGAT
GAAGTTCTGA CGAACGGTGG CCTGGTTGGT CGCGTAACCA AAGTAGCGGA AAACGGCTAC
ATTGCTATCG CGCTGAATGA CACCACTGAA GTAGTTATTA AACGTGACTT CGTAGCTGCC
GTCCTGCCGA AAGGCACCAT GAAGGCGCTG TAA
 
Protein sequence
MSFFISDAVA ATGAPAQGSP MSLILMLVVF GLIFYFMILR PQQKRTKEHK KLMDSIAKGD 
EVLTNGGLVG RVTKVAENGY IAIALNDTTE VVIKRDFVAA VLPKGTMKAL