Gene EcolC_3166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3166 
Symbol 
ID6066540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3469143 
End bp3470924 
Gene Length1782 bp 
Protein Length593 aa 
Translation table11 
GC content56% 
IMG OID641602582 
Productputative multidrug transporter membraneATP-binding components 
Protein accessionYP_001726116 
Protein GI170021162 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAGTT TTAGCCAACT GTGGCCGACT CTCAAGCGCC TGTTAGCGTA CGGTTCACCG 
TGGCGTAAAC CGCTGGGGAT TGCGGTCCTG ATGATGTGGG TTGCGGCGGC GGCAGAAGTC
AGTGGGCCGC TGCTTATCAG CTATTTTATC GACAATATGG TAGCGAAAAA TAACCTGCCG
TTGAAAGTGG TTGCAGGGCT GGCTGCGGCG TATGTTGGGC TGCAACTGTT TGCCGCCGGG
CTACATTACG CGCAGTCGCT GCTGTTTAAT CGGGCGGCAG TAGGCGTAGT GCAACAGTTG
CGTACCGACG TGATGGATGC TGCGTTACGC CAGCCATTAA GCGAGTTTGA TACCCAACCC
GTCGGGCAGG TGATTTCCCG CGTCACTAAT GACACTGAAG TGATCCGCGA TCTCTACGTT
ACCGTAGTGG CAACTGTCCT GCGCAGTGCC GCGCTGGTGG GCGCGATGCT GGTGGCGATG
TTCAGCCTCG ACTGGCGAAT GGCACTGGTG GCGATAATGA TTTTCCCGGT GGTGCTGGTG
GTAATGGTGA TATACCAGCG TTACAGCACG CCGATTGTCC GTCGTGTGCG CGCCTATCTG
GCGGATATCA ACGACGGCTT TAACGAAATC ATCAATGGCA TGAGCGTTAT TCAGCAGTTT
CGTCAGCAGG CGCGATTTGG CGAACGTATG GGGGAGGCCA GTCGTTCACA CTATATGGCG
AGGATGCAAA CCCTGCGCCT CGACGGTTTT CTGCTGCGTC CGCTGCTGAG TCTGTTTTCA
TCGCTCATTC TTTGTGGCTT GTTGATGCTG TTTGGCTTCT CCGCTAGCGG CACCATTGAA
GTGGGCGTGC TGTATGCGTT TATCAGCTAT CTTGGGCGAC TTAACGAACC ATTAATCGAA
CTGACCACGC AACAGGCGAT GCTGCAACAG GCTGTTGTTG CTGGTGAGCG CGTGTTTGAA
CTGATGGACG GACCGCGCCA GCAATATGGC AATGATGATC GCCCGTTACA GAGTGGCACC
ATCGAGGTCG ATAACGTGTC ATTTGCTTAT CGCGATGACA ATCTGGTGCT AAAGAACATT
AATCTCTCTG TGCCTTCGCG TAACTTTGTG GCACTGGTCG GGCATACCGG CAGTGGCAAA
AGCACCCTCG CCAGTTTATT GATGGGCTAT TACCCGCTAA CGGAAGGTGA GATTCGCCTT
GATGGTCGTC CATTAAGTTC GCTAAGTCAC AGCGCGCTGC GCCAGGGCGT GGCAATGGTG
CAGCAAGATC CGGTGGTGCT GGCGGATACC TTCCTCGCCA ACGTGACGCT GGGGCGTGAT
ATCTCCGAAG AACGCGTCTG GCAGGCGCTG GAAACCGTGC AACTGGCGGA GCTGGCGCGC
AGCATGAGTG ATGGTATTTA TACGCCGCTG GGCGAGCAGG GGAATAATCT CTCCGTCGGG
CAAAAGCAAC TGCTGGCACT GGCACGCGTG TTGGTGGAGA CGCCGCAAAT CCTGATCCTT
GATGAGGCAA CCGCCAGCAT TGACTCCGGT ACTGAACAGG CGATTCAACA TGCTCTGGCG
GCTGTGCGTG AACATACCAC GCTGGTGGTG ATTGCTCACC GCTTATCGAC CATTGTTGAT
GCCGACACCA TTCTGGTGCT TCATCGTGGG CAAGCCGTGG AGCAGGGCAC TCACCAGCAA
CTGCTGGCGG CCCAGGGACG CTACTGGCAG ATGTATCAAC TGCAACTTGC GGGCGAAGAG
CTGGCAGCCA GCGTGCGTGA AGAAGAATCA TTGAGCGCCT GA
 
Protein sequence
MRSFSQLWPT LKRLLAYGSP WRKPLGIAVL MMWVAAAAEV SGPLLISYFI DNMVAKNNLP 
LKVVAGLAAA YVGLQLFAAG LHYAQSLLFN RAAVGVVQQL RTDVMDAALR QPLSEFDTQP
VGQVISRVTN DTEVIRDLYV TVVATVLRSA ALVGAMLVAM FSLDWRMALV AIMIFPVVLV
VMVIYQRYST PIVRRVRAYL ADINDGFNEI INGMSVIQQF RQQARFGERM GEASRSHYMA
RMQTLRLDGF LLRPLLSLFS SLILCGLLML FGFSASGTIE VGVLYAFISY LGRLNEPLIE
LTTQQAMLQQ AVVAGERVFE LMDGPRQQYG NDDRPLQSGT IEVDNVSFAY RDDNLVLKNI
NLSVPSRNFV ALVGHTGSGK STLASLLMGY YPLTEGEIRL DGRPLSSLSH SALRQGVAMV
QQDPVVLADT FLANVTLGRD ISEERVWQAL ETVQLAELAR SMSDGIYTPL GEQGNNLSVG
QKQLLALARV LVETPQILIL DEATASIDSG TEQAIQHALA AVREHTTLVV IAHRLSTIVD
ADTILVLHRG QAVEQGTHQQ LLAAQGRYWQ MYQLQLAGEE LAASVREEES LSA