Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3166 |
Symbol | |
ID | 6066540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 3469143 |
End bp | 3470924 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641602582 |
Product | putative multidrug transporter membraneATP-binding components |
Protein accession | YP_001726116 |
Protein GI | 170021162 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAGTT TTAGCCAACT GTGGCCGACT CTCAAGCGCC TGTTAGCGTA CGGTTCACCG TGGCGTAAAC CGCTGGGGAT TGCGGTCCTG ATGATGTGGG TTGCGGCGGC GGCAGAAGTC AGTGGGCCGC TGCTTATCAG CTATTTTATC GACAATATGG TAGCGAAAAA TAACCTGCCG TTGAAAGTGG TTGCAGGGCT GGCTGCGGCG TATGTTGGGC TGCAACTGTT TGCCGCCGGG CTACATTACG CGCAGTCGCT GCTGTTTAAT CGGGCGGCAG TAGGCGTAGT GCAACAGTTG CGTACCGACG TGATGGATGC TGCGTTACGC CAGCCATTAA GCGAGTTTGA TACCCAACCC GTCGGGCAGG TGATTTCCCG CGTCACTAAT GACACTGAAG TGATCCGCGA TCTCTACGTT ACCGTAGTGG CAACTGTCCT GCGCAGTGCC GCGCTGGTGG GCGCGATGCT GGTGGCGATG TTCAGCCTCG ACTGGCGAAT GGCACTGGTG GCGATAATGA TTTTCCCGGT GGTGCTGGTG GTAATGGTGA TATACCAGCG TTACAGCACG CCGATTGTCC GTCGTGTGCG CGCCTATCTG GCGGATATCA ACGACGGCTT TAACGAAATC ATCAATGGCA TGAGCGTTAT TCAGCAGTTT CGTCAGCAGG CGCGATTTGG CGAACGTATG GGGGAGGCCA GTCGTTCACA CTATATGGCG AGGATGCAAA CCCTGCGCCT CGACGGTTTT CTGCTGCGTC CGCTGCTGAG TCTGTTTTCA TCGCTCATTC TTTGTGGCTT GTTGATGCTG TTTGGCTTCT CCGCTAGCGG CACCATTGAA GTGGGCGTGC TGTATGCGTT TATCAGCTAT CTTGGGCGAC TTAACGAACC ATTAATCGAA CTGACCACGC AACAGGCGAT GCTGCAACAG GCTGTTGTTG CTGGTGAGCG CGTGTTTGAA CTGATGGACG GACCGCGCCA GCAATATGGC AATGATGATC GCCCGTTACA GAGTGGCACC ATCGAGGTCG ATAACGTGTC ATTTGCTTAT CGCGATGACA ATCTGGTGCT AAAGAACATT AATCTCTCTG TGCCTTCGCG TAACTTTGTG GCACTGGTCG GGCATACCGG CAGTGGCAAA AGCACCCTCG CCAGTTTATT GATGGGCTAT TACCCGCTAA CGGAAGGTGA GATTCGCCTT GATGGTCGTC CATTAAGTTC GCTAAGTCAC AGCGCGCTGC GCCAGGGCGT GGCAATGGTG CAGCAAGATC CGGTGGTGCT GGCGGATACC TTCCTCGCCA ACGTGACGCT GGGGCGTGAT ATCTCCGAAG AACGCGTCTG GCAGGCGCTG GAAACCGTGC AACTGGCGGA GCTGGCGCGC AGCATGAGTG ATGGTATTTA TACGCCGCTG GGCGAGCAGG GGAATAATCT CTCCGTCGGG CAAAAGCAAC TGCTGGCACT GGCACGCGTG TTGGTGGAGA CGCCGCAAAT CCTGATCCTT GATGAGGCAA CCGCCAGCAT TGACTCCGGT ACTGAACAGG CGATTCAACA TGCTCTGGCG GCTGTGCGTG AACATACCAC GCTGGTGGTG ATTGCTCACC GCTTATCGAC CATTGTTGAT GCCGACACCA TTCTGGTGCT TCATCGTGGG CAAGCCGTGG AGCAGGGCAC TCACCAGCAA CTGCTGGCGG CCCAGGGACG CTACTGGCAG ATGTATCAAC TGCAACTTGC GGGCGAAGAG CTGGCAGCCA GCGTGCGTGA AGAAGAATCA TTGAGCGCCT GA
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Protein sequence | MRSFSQLWPT LKRLLAYGSP WRKPLGIAVL MMWVAAAAEV SGPLLISYFI DNMVAKNNLP LKVVAGLAAA YVGLQLFAAG LHYAQSLLFN RAAVGVVQQL RTDVMDAALR QPLSEFDTQP VGQVISRVTN DTEVIRDLYV TVVATVLRSA ALVGAMLVAM FSLDWRMALV AIMIFPVVLV VMVIYQRYST PIVRRVRAYL ADINDGFNEI INGMSVIQQF RQQARFGERM GEASRSHYMA RMQTLRLDGF LLRPLLSLFS SLILCGLLML FGFSASGTIE VGVLYAFISY LGRLNEPLIE LTTQQAMLQQ AVVAGERVFE LMDGPRQQYG NDDRPLQSGT IEVDNVSFAY RDDNLVLKNI NLSVPSRNFV ALVGHTGSGK STLASLLMGY YPLTEGEIRL DGRPLSSLSH SALRQGVAMV QQDPVVLADT FLANVTLGRD ISEERVWQAL ETVQLAELAR SMSDGIYTPL GEQGNNLSVG QKQLLALARV LVETPQILIL DEATASIDSG TEQAIQHALA AVREHTTLVV IAHRLSTIVD ADTILVLHRG QAVEQGTHQQ LLAAQGRYWQ MYQLQLAGEE LAASVREEES LSA
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