| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3154 |
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| Symbol | |
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| ID | 6066489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 3457157 |
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| End bp | 3460306 |
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| Gene Length | 3150 bp |
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| Protein Length | 1049 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641602570 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001726104 |
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| Protein GI | 170021150 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAATT TCTTTATCGA TCGCCCGATT TTTGCGTGGG TGATCGCCAT TATCATCATG
TTGGCAGGGG GGCTGGCGAT CCTCAAACTG CCGGTGGCGC AATATCCTAC GATTGCACCG
CCGGCAGTAA CGATCTCCGC CTCCTACCCC GGCGCTGATG CGAAAACAGT GCAGGACACG
GTGACACAGG TTATCGAACA GAATATGAAC GGTATCGATA ACCTGATGTA CATGTCCTCT
AACAGTGACT CCACGGGTAC CGTGCAGATC ACCCTGACCT TTGAGTCTGG TACTGATGCG
GATATCGCGC AGGTTCAGGT GCAGAACAAA CTGCAGCTGG CGATGCCGTT GCTGCCGCAA
GAAGTTCAGC AGCAAGGGGT GAGCGTTGAG AAATCATCCA GCAGCTTCCT GATGGTTGTC
GGCGTTATCA ACACCGATGG CACCATGACG CAGGAGGATA TCTCCGACTA CGTGGCGGCG
AATATGAAAG ATGCCATCAG CCGTACGTCG GGCGTGGGTG ATGTTCAGTT GTTCGGTTCA
CAGTACGCGA TGCGTATCTG GATGAACCCG AATGAGCTGA ACAAATTCCA GCTAACGCCG
GTTGATGTCA TTACCGCCAT CAAAGCGCAG AACGCCCAGG TTGCGGCGGG TCAGCTCGGT
GGTACGCCGC CGGTGAAAGG CCAACAGCTT AACGCCTCTA TTATTGCTCA GACGCGTCTG
ACCTCTACTG AAGAGTTCGG CAAAATCCTG CTGAAAGTGA ATCAGGATGG TTCCCGCGTG
CTGCTGCGTG ACGTCGCGAA GATTGAGCTG GGTGGTGAGA ACTACGACAT CATCGCAGAG
TTTAACGGCC AACCGGCTTC CGGTCTGGGG ATCAAGCTGG CGACCGGTGC AAACGCGCTG
GATACCGCTG CGGCAATCCG TGCTGAACTG GCGAAGATGG AACCGTTCTT CCCGTCGGGT
CTGAAAATTG TTTACCCATA CGACACCACG CCGTTCGTGA AAATCTCTAT TCACGAAGTG
GTTAAAACGC TGGTCGAAGC GATCATCCTC GTGTTCCTGG TTATGTATCT GTTCCTGCAG
AACTTCCGCG CGACGTTGAT TCCGACCATT GCCGTACCGG TGGTATTGCT CGGGACCTTT
GCCGTCCTTG CCGCCTTTGG CTTCTCGATA AACACGCTAA CAATGTTCGG GATGGTGCTC
GCCATCGGCC TGTTGGTGGA TGACGCCATC GTTGTGGTAG AAAACGTTGA GCGTGTTATG
GCGGAAGAAG GTTTGCCGCC AAAAGAAGCT ACCCGTAAGT CGATGGGGCA GATTCAGGGC
GCTCTGGTCG GTATCGCGAT GGTACTGTCG GCGGTATTCG TACCGATGGC CTTCTTTGGC
GGTTCTACTG GTGCTATCTA TCGTCAGTTC TCTATTACCA TTGTTTCAGC AATGGCGCTG
TCGGTACTGG TGGCGTTGAT CCTGACTCCA GCTCTTTGTG CCACCATGCT GAAACCGATT
GCCAAAGGCG ATCACGGGGA AGGTAAAAAA GGCTTCTTCG GCTGGTTTAA CCGCATGTTC
GAGAAGAGCA CGCACCACTA CACCGACAGC GTAGGCGGTA TTCTGCGCAG TACGGGGCGT
TACCTGGTGC TGTATCTGAT CATCGTGGTC GGCATGGCCT ATCTGTTCGT GCGTCTGCCA
AGCTCCTTCT TGCCAGATGA GGACCAGGGC GTGTTTATGA CCATGGTTCA GCTGCCAGCA
GGTGCAACGC AGGAACGTAC ACAGAAAGTG CTCAATGAGG TAACGCATTA CTATCTGACC
AAAGAAAAGA ACAACGTTGA GTCGGTGTTC GCCGTTAACG GCTTCGGCTT TGCGGGACGT
GGTCAGAATA CCGGTATTGC GTTCGTTTCC TTGAAGGACT GGGCCGATCG TCCGGGCGAA
GAAAACAAAG TTGAAGCGAT TACCATGCGT GCAACACGCG CTTTCTCGCA AATCAAAGAT
GCGATGGTTT TCGCCTTTAA CCTGCCCGCA ATCGTGGAAC TGGGTACTGC AACCGGCTTT
GACTTTGAGC TGATTGACCA GGCTGGCCTT GGTCACGAAA AACTGACTCA GGCGCGTAAC
CAGTTGCTTG CAGAAGCAGC GAAGCACCCT GATATGTTGA CCAGCGTACG TCCAAACGGT
CTGGAAGATA CCCCGCAGTT TAAGATTGAT ATCGACCAGG AAAAAGCGCA GGCGCTGGGT
GTTTCTATCA ACGACATTAA CACCACTCTG GGCGCTGCAT GGGGCGGCAG CTATGTGAAC
GACTTTATCG ACCGCGGTCG TGTGAAGAAA GTTTATGTCA TGTCAGAAGC GAAATACCGT
ATGCTGCCGG ATGATATCGG CGACTGGTAT GTTCGTGCTG CTGATGGTCA GATGGTGCCA
TTCTCGGCGT TCTCCTCTTC TCGTTGGGAG TACGGTTCGC CGCGTCTGGA ACGTTACAAC
GGCCTGCCAT CCATGGAAAT CTTAGGCCAG GCGGCACCGG GTAAAAGTAC CGGTGAAGCA
ATGGAGCTGA TGGAACAACT GGCGAGCAAA CTGCCTACCG GTGTTGGCTA TGACTGGACG
GGGATGTCCT ATCAGGAACG TCTCTCCGGC AACCAGGCAC CTTCACTGTA CGCGATTTCG
TTGATTGTCG TGTTCCTGTG TCTGGCGGCG CTGTACGAGA GCTGGTCGAT TCCGTTCTCC
GTTATGCTGG TCGTTCCGCT GGGGGTTATC GGTGCGTTGC TGGCTGCCAC CTTCCGTGGC
CTGACCAATG ACGTTTACTT CCAGGTAGGC CTGCTCACAA CCATTGGGTT GTCGGCGAAG
AACGCGATCC TTATCGTCGA ATTCGCCAAA GACTTGATGG ATAAAGAAGG TAAAGGTCTG
ATTGAAGCGA CGCTTGATGC GGTGCGGATG CGTTTACGTC CGATCCTGAT GACCTCGCTG
GCGTTTATCC TCGGCGTTAT GCCGCTGGTT ATCAGTACTG GTGCTGGTTC CGGCGCGCAG
AACGCAGTAG GTACCGGTGT AATGGGCGGG ATGGTGACCG CAACGGTACT GGCAATCTTC
TTCGTTCCGG TATTCTTTGT GGTGGTTCGC CGCCGCTTTA GCCGCAAGAA TGAAGATATC
GAGCACAGCC ATACTGTCGA TCATCATTGA
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| Protein sequence | MPNFFIDRPI FAWVIAIIIM LAGGLAILKL PVAQYPTIAP PAVTISASYP GADAKTVQDT
VTQVIEQNMN GIDNLMYMSS NSDSTGTVQI TLTFESGTDA DIAQVQVQNK LQLAMPLLPQ
EVQQQGVSVE KSSSSFLMVV GVINTDGTMT QEDISDYVAA NMKDAISRTS GVGDVQLFGS
QYAMRIWMNP NELNKFQLTP VDVITAIKAQ NAQVAAGQLG GTPPVKGQQL NASIIAQTRL
TSTEEFGKIL LKVNQDGSRV LLRDVAKIEL GGENYDIIAE FNGQPASGLG IKLATGANAL
DTAAAIRAEL AKMEPFFPSG LKIVYPYDTT PFVKISIHEV VKTLVEAIIL VFLVMYLFLQ
NFRATLIPTI AVPVVLLGTF AVLAAFGFSI NTLTMFGMVL AIGLLVDDAI VVVENVERVM
AEEGLPPKEA TRKSMGQIQG ALVGIAMVLS AVFVPMAFFG GSTGAIYRQF SITIVSAMAL
SVLVALILTP ALCATMLKPI AKGDHGEGKK GFFGWFNRMF EKSTHHYTDS VGGILRSTGR
YLVLYLIIVV GMAYLFVRLP SSFLPDEDQG VFMTMVQLPA GATQERTQKV LNEVTHYYLT
KEKNNVESVF AVNGFGFAGR GQNTGIAFVS LKDWADRPGE ENKVEAITMR ATRAFSQIKD
AMVFAFNLPA IVELGTATGF DFELIDQAGL GHEKLTQARN QLLAEAAKHP DMLTSVRPNG
LEDTPQFKID IDQEKAQALG VSINDINTTL GAAWGGSYVN DFIDRGRVKK VYVMSEAKYR
MLPDDIGDWY VRAADGQMVP FSAFSSSRWE YGSPRLERYN GLPSMEILGQ AAPGKSTGEA
MELMEQLASK LPTGVGYDWT GMSYQERLSG NQAPSLYAIS LIVVFLCLAA LYESWSIPFS
VMLVVPLGVI GALLAATFRG LTNDVYFQVG LLTTIGLSAK NAILIVEFAK DLMDKEGKGL
IEATLDAVRM RLRPILMTSL AFILGVMPLV ISTGAGSGAQ NAVGTGVMGG MVTATVLAIF
FVPVFFVVVR RRFSRKNEDI EHSHTVDHH
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