Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3086 |
Symbol | |
ID | 6066218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 3380787 |
End bp | 3381548 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641602502 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001726037 |
Protein GI | 170021083 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.790206 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATTGA GCAGCAGTGA ACCTTGCGTG GTGATCCTGA CCGAAAAAGA GGTAGAGGTA AGCGTCAATA ACCATGCTAC GTTTACCCTT CCGAAAAACT ACCTGGCCGC CTTCGCGTGC AACAATAACG TCATTGAACT CTCAACGTTA AATCACGTAT TAATCACCCA CATCAACCGT AACATCATCA ACGATTATCT GTTGTTTTTA AATAAGAACT TAACCTGTGT AAAGCCCTGG TCGCGGCTGG CAACCCCGGT TATCGCTTGT CATAGCCGTA CACCGGAAGT GTTCCGGCTA GCCGCCAACC ACAGCAAGCA GCAACCCAGC AAACCCTGCG AAGCGGAGTT GACGCGCGCA TTACTTTTTA CCGTATTGTC TAACTTTCTT GAGCAATCGC GGTTTATTGC CCTACTGATG TATATCTTAC GCAGCAGCGT CCGCGACAGC GTCTGCCGCA TTATTCAAAG CGATATTCAG CATTACTGGA ATCTGCGAAT TGTCGCCAGT TCGCTATGTT TAAGCCCCAG CCTGCTCAAA AAGAAATTAA AAAACGAAAA TACCAGCTAT AGCCAGATTG TCACAGAGTG TCGTATGCGT TACGCCGTAC AGATGTTATT GATGGATAAC AAAAATATCA CTCAGGTGGC GCAATTATGT GGCTATAGCA GCACGTCGTA CTTTATCTCT GTTTTTAAGG CGTTTTACGG CCTGACACCG TTGAATTATC TCGCCAAACA GCGACAAAAA GTGATGTGGT GA
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Protein sequence | MQLSSSEPCV VILTEKEVEV SVNNHATFTL PKNYLAAFAC NNNVIELSTL NHVLITHINR NIINDYLLFL NKNLTCVKPW SRLATPVIAC HSRTPEVFRL AANHSKQQPS KPCEAELTRA LLFTVLSNFL EQSRFIALLM YILRSSVRDS VCRIIQSDIQ HYWNLRIVAS SLCLSPSLLK KKLKNENTSY SQIVTECRMR YAVQMLLMDN KNITQVAQLC GYSSTSYFIS VFKAFYGLTP LNYLAKQRQK VMW
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