Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3071 |
Symbol | |
ID | 6066171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 3355366 |
End bp | 3358509 |
Gene Length | 3144 bp |
Protein Length | 1047 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641602487 |
Product | CzcA family heavy metal efflux protein |
Protein accession | YP_001726022 |
Protein GI | 170021068 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAAT GGATTATTCG TCGCTCGGTG GCGAACCGTT TTTTGGTGCT GATGGGCGCG TTGTTTCTGA GCATCTGGGG CACCTGGACC ATCATTAATA CGCCAGTGGA TGCGCTGCCG GATCTCTCCG ATGTGCAGGT TATTATTAAA ACCAGCTATC CCGGTCAGGC ACCACAAATC GTTGAAAATC AGGTGACTTA TCCGCTAACC ACCACCATGT TGTCGGTGCC TGGCGCGAAG ACTGTGCGCG GTTTCTCACA GTTTGGCGAC TCTTATGTGT ATGTCATTTT CGAAGATGGC ACCGATCCGT ACTGGGCGCG TTCGCGGGTG CTGGAGTACC TCAACCAGGT ACAGGGTAAG CTGCCTGCGG GAGTCAGCGC CGAGCTGGGG CCAGATGCCA CGGGTGTTGG CTGGATCTAT GAATATGCAC TGGTGGATCG CAGCGGTAAG CACGATCTGG CCGATTTACG CTCATTACAG GACTGGTTTC TCAAATATGA GCTGAAAACC ATCCCTGACG TTGCGGAAGT GGCGTCGGTG GGCGGTGTGG TGAAAGAGTA TCAGGTGGTT ATCGATCCCC AGCGCCTGGC GCAGTATGGC ATCAGTCTCG CCGAAGTAAA AAGCGCGCTG GATGCTTCAA ACCAGGAAGC GGGCGGTTCG TCGATCGAAC TGGCGGAAGC GGAATATATG GTGCGCGCCA GCGGCTATCT GCAAACGCTC GACGACTTTA ATCACATCGT TTTAAAAGCC AGTGAAAATG GCGTGCCCGT TTATCTGCGC GATGTTGCGA AGGTCCAGAT TGGCCCGGAG ATGCGCCGGG GCATTGCCGA ACTAAACGGC GAAGGCGAAG TGGCGGGCGG GGTGGTGATC CTGCGATCCG GCAAAAACGC CCGAGAAGTG ATCGCCGCCG TGAAGGACAA ACTGGAAACG CTGAAAAGTA GTCTGCCGGA AGGCGTGGAG ATAGTTACAA CATACGATCG CAGCCAGCTC ATTGACCGCG CCATCGACAA CCTCAGCGGC AAGTTGCTGG AAGAGTTTAT TGTGGTGGCG GTAGTCTGTG CGCTGTTTCT CTGGCATGTG CGCTCGGCGC TGGTGGCGAT TATTTCGTTG CCGCTGGGGT TGTGTATTGC TTTTATTGTC ATGCACTTCC AGGGACTGAA TGCCAATATT ATGTCGTTGG GTGGCATTGC GATTGCCGTC GGGGCGATGG TCGATGCTGC TATCGTCATG ATCGAGAATG CGCATAAACG GCTGGAAGAG TGGCAGCACC AGCATCCTGA CGCCACGCTG GATAATAAAA CGCGCTGGCA GGTGATCACC GATGCGTCTG TTGAAGTGGG GCCGGCGCTA TTTATCAGTC TGCTGATTAT CACGTTGTCG TTTATCCCGA TCTTCACCCT GGAAGGGCAG GAAGGGCGTC TGTTTGGCCC GTTGGCGTTC ACCAAAACGT ATGCGATGGC GGGTGCGGCG CTGCTGGCGA TCGTAGTGAT CCCGATCCTG ATGGGCTACT GGATCCGTGG CAAAATTCCG CCGGAAAGCA GTAACCCGCT CAATCGCTTT TTGATTCGTG TTTATCATCC GCTGTTGCTG AAAGTACTGC ACTGGCCGAA AACCACGCTG CTGGTGGCGG CGCTTTCGGT GCTGACGGTT CTCTGGCCGC TCAATAAAGT TGGCGGGGAA TTTTTACCGC AGATCAATGA AGGCGACTTG TTGTATATGC CATCGACGCT GCCGGGGATT TCCGCAGCAG AGGCGGCGAG TATGCTGCAA AAAACCGACA AGCTAATTAT GAGCGTACCT GAAGTGGCGC GGGTATTTGG CAAAACCGGG AAAGCGGAAA CCGCCACCGA TTCTGCTCCG CTGGAGATGG TAGAAACGAC CATCCAGCTT AAGCCGCAGG AGCAGTGGCG GCCAGGCATG ACGATGGACA AAATCATTGA GGAACTGGAT AACACCGTGC GGCTGCCGGG GCTGGCGAAT CTGTGGGTGC CGCCAATTCG TAACCGTATC GATATGCTCT CAACCGGCAT TAAAAGCCCC ATCGGCATTA AAGTTTCCGG CACTGTGCTG GCGGATATCG ACGCGATGGC TGAGCAAATT GAAGAAGTAG CGCGAACGGT GCCAGGCGTA GCTTCTGCGC TTGCCGAGCG GCTGGAAGGT GGGCGCTATA TCAACGTTGA GATTAACCGT GAAAAAGCCG CACGTTACGG TATGACGGTG GCGGATGTGC AGTTGTTTGT GACTTCTGCG GTGGGCGGGG CGATGGTTGG CGAAACGGTG GAAGGGATTG CCCGTTATCC AATTAATCTG CGTTATCCGC AAAGCTGGCG CGATAGTCCG CAGGCACTGC GCCAGCTGCC GATCCTGACG CCGATGAAGC AGCAAATCAC CCTGGCAGAC GTGGCCGACA TTAAAGTCTC TACCGGACCG TCGATGCTGA AAACCGAGAA TGCGCGCCCG ACGAGCTGGA TTTATATCGA TGCCCGCGAT CGTGACATGG TGTCGGTGGT TCACGATTTG CAAAAAGCGA TAGCTGAAAA AGTGCAGTTA AAACCGGGCA CCAGCGTGGC ATTCTCCGGG CAGTTCGAGC TACTGGAGCG CGCCAACCAT AAGCTTAAAC TCATGGTGCC GATGACGTTG ATGATTATCT TCGTGCTGTT GTATCTGGCG TTCCGTCGGG TGGGCGAAGC GTTGCTGATT ATCAGCAGCG TACCGTTTGC GCTGGTGGGC GGCATCTGGT TGCTGTGGTG GATGGGCTTT CATCTTTCCG TGGCGACGGG CACTGGCTTT ATCGCCCTCG CCGGGGTCGC CGCCGAATTT GGCGTGGTGA TGCTGATGTA TTTACGTCAC GCCATAGAGG CCGTGCCGTC GTTGAATAAT CCACAAACAT TCAGCGAGCA GAAGCTGGAT GAGGCGTTAT ATCACGGCGC GGTCCTGCGC GTGCGCCCGA AAGCGATGAC GGTGGCGGTG ATTATCGCCG GTCTGCTGCC GATTCTGTGG GGAACGGGGG CTGGTTCAGA GGTGATGAGC CGGATTGCCG CGCCGATGAT TGGCGGCATG ATCACCGCAC CTTTGCTGTC GCTGTTTATT ATCCCGGCGG CGTATAAGCT GATGTGGCTG CACCGACATC GGGTACGGAA ATAA
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Protein sequence | MIEWIIRRSV ANRFLVLMGA LFLSIWGTWT IINTPVDALP DLSDVQVIIK TSYPGQAPQI VENQVTYPLT TTMLSVPGAK TVRGFSQFGD SYVYVIFEDG TDPYWARSRV LEYLNQVQGK LPAGVSAELG PDATGVGWIY EYALVDRSGK HDLADLRSLQ DWFLKYELKT IPDVAEVASV GGVVKEYQVV IDPQRLAQYG ISLAEVKSAL DASNQEAGGS SIELAEAEYM VRASGYLQTL DDFNHIVLKA SENGVPVYLR DVAKVQIGPE MRRGIAELNG EGEVAGGVVI LRSGKNAREV IAAVKDKLET LKSSLPEGVE IVTTYDRSQL IDRAIDNLSG KLLEEFIVVA VVCALFLWHV RSALVAIISL PLGLCIAFIV MHFQGLNANI MSLGGIAIAV GAMVDAAIVM IENAHKRLEE WQHQHPDATL DNKTRWQVIT DASVEVGPAL FISLLIITLS FIPIFTLEGQ EGRLFGPLAF TKTYAMAGAA LLAIVVIPIL MGYWIRGKIP PESSNPLNRF LIRVYHPLLL KVLHWPKTTL LVAALSVLTV LWPLNKVGGE FLPQINEGDL LYMPSTLPGI SAAEAASMLQ KTDKLIMSVP EVARVFGKTG KAETATDSAP LEMVETTIQL KPQEQWRPGM TMDKIIEELD NTVRLPGLAN LWVPPIRNRI DMLSTGIKSP IGIKVSGTVL ADIDAMAEQI EEVARTVPGV ASALAERLEG GRYINVEINR EKAARYGMTV ADVQLFVTSA VGGAMVGETV EGIARYPINL RYPQSWRDSP QALRQLPILT PMKQQITLAD VADIKVSTGP SMLKTENARP TSWIYIDARD RDMVSVVHDL QKAIAEKVQL KPGTSVAFSG QFELLERANH KLKLMVPMTL MIIFVLLYLA FRRVGEALLI ISSVPFALVG GIWLLWWMGF HLSVATGTGF IALAGVAAEF GVVMLMYLRH AIEAVPSLNN PQTFSEQKLD EALYHGAVLR VRPKAMTVAV IIAGLLPILW GTGAGSEVMS RIAAPMIGGM ITAPLLSLFI IPAAYKLMWL HRHRVRK
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